RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 A0A0G2JMP0 313 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 TMEM189-UBE2V1I3L0A0 370 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 UPK1AO00322 258 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 IGFBP4P22692 258 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 CHAF1BQ13112 559 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 EIF2B5Q13144 721 aaKnown RBP16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ILKQ13418 452 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 IRAK1BP1Q5VVH5 260 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ALKAL2Q6UX46 152 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 OR4M2Q8NGB6 313 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 THAP6Q8TBB0 222 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 TMEM163Q8TC26 289 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 PRRC1Q96M27 445 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 GON7Q9BXV9 100 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 TM7SF3Q9NS93 570 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 GRHPRQ9UBQ7 328 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 MED16Q9Y2X0 877 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 IER3IP1Q9Y5U9 82 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 GXYLT2A0PJZ3 443 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ZC3H12DA2A288 527 aaKnown RBP16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 M0R082 166 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 SOX1O00570 391 aaPredicted RBP16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 FGF19O95750 216 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 SMCO1Q147U7 214 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 LTB4RQ15722 352 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ASPGQ86U10 573 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 CMKLR1Q99788 373 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 METTL8Q9H825 291 aaKnown RBP16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 WSB2Q9NYS7 404 aaPredicted RBP16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ACSL5Q9ULC5 683 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 TVP23AA6NH52 213 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 H7C2Y5 167 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 UBXN7O94888 489 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 PRR35P0CG20 571 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 ACP2P11117 423 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 RPL35P42766 123 aaKnown RBP16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 S100A10P60903 97 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 BEX5Q5H9J7 111 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 LYPD4Q6UWN0 246 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 PLCZ1Q86YW0 608 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 UBQLNLQ8IYU4 475 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 MS4A15Q8N5U1 240 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 ZDHHC1Q8WTX9 485 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 ACOT12Q8WYK0 555 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 NXPE2Q96DL1 559 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 SLC38A3Q99624 504 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 SLC6A7Q99884 636 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 C1QTNF3Q9BXJ4 246 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 STARD5Q9NSY2 213 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 ACOD1A6NK06 481 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 IGFALSP35858 605 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 PLK5Q496M5 336 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 CNKSR3Q6P9H4 555 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 TTLL10Q6ZVT0 673 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 PRSS45Q7RTY3 260 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 ZNF227Q86WZ6 799 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 SPAG16Q8N0X2 631 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 CHFRQ96EP1 664 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 DGAT2Q96PD7 388 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 TMEM5Q9Y2B1 443 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 TRAPPC13A5PLN9 417 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 KLK8O60259 260 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 RRAS2P62070 204 aaPredicted RBP16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 DEFB103AP81534 67 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 IFITM3Q01628 133 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 DEFB119Q8N690 84 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 CCDC107Q8WV48 283 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 HOXD1Q9GZZ0 328 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 MVB12BQ9H7P6 319 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 NTNG1Q9Y2I2 539 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 CCDC88CQ9P219 2028 aa16.8■□□□□ 0.28
ATPAF1-214ENST00000576409 DISC1C4P0D8 188 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 EEF1E1-BLOC1S5C9J1V9 151 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 MAGEB4O15481 346 aaPredicted RBP16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 C1QCP02747 245 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 EXOSC7Q15024 291 aaKnown RBP16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 C18orf63Q68DL7 685 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 IQCF2Q8IXL9 164 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 ACOT11Q8WXI4 607 aaPredicted RBP16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 THAP4Q8WY91 577 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 HS6ST2Q96MM7 605 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 TSNAXQ99598 290 aaKnown RBP16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 NRAPQ86VF7 1730 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 CARNS1A5YM72 827 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 K7ESM1 405 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 IRF5Q13568 498 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 GGTA1PQ4G0N0 100 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 ESPNLQ6ZVH7 1005 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 CREB3L4Q8TEY5 395 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 TMEM239Q8WW34 195 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 MNTQ99583 582 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 MTHFD2LQ9H903 347 aaPredicted RBP16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 SVILO95425 2214 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 GOLGB1Q14789 3259 aaKnown RBP16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 VEGFDO43915 354 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 HMGA1P17096 107 aaKnown RBP16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 TCEAL8Q8IYN2 117 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 TMEM41AQ96HV5 264 aa16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 RBM7Q9Y580 266 aaKnown RBP16.79■□□□□ 0.28
ATPAF1-214ENST00000576409 ZNFX1Q9P2E3 1918 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms