RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CBLCQ9ULV8 474 aa7.23□□□□□ -1.25
CCDC40-215ENST00000576033 NPIPA1Q9UND3 350 aa7.23□□□□□ -1.25
CCDC40-215ENST00000576033 KLF13Q9Y2Y9 288 aaPredicted RBP7.23□□□□□ -1.25
CCDC40-215ENST00000576033 LRRC42Q9Y546 428 aa7.23□□□□□ -1.25
CCDC40-215ENST00000576033 RP1L1Q8IWN7 2480 aaPredicted RBP7.23□□□□□ -1.25
CCDC40-215ENST00000576033 LRRK2Q5S007 2527 aa7.23□□□□□ -1.25
CCDC40-215ENST00000576033 A0A096LPI6 279 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 AQP12BA6NM10 295 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 RFXANKO14593 260 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 TFECO14948 347 aaPredicted RBP7.22□□□□□ -1.25
CCDC40-215ENST00000576033 ACOX3O15254 700 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 TRIM3O75382 744 aaPredicted RBP7.22□□□□□ -1.25
CCDC40-215ENST00000576033 TNFRSF21O75509 655 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 GLSO94925 669 aaPredicted RBP7.22□□□□□ -1.25
CCDC40-215ENST00000576033 ANP32DO95626 131 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 P04436 131 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 HTR1EP28566 365 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 EVI2BP34910 448 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 CHI3L1P36222 383 aaPredicted RBP7.22□□□□□ -1.25
CCDC40-215ENST00000576033 TRPC1P48995 793 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 GSK3BP49841 420 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 GZMMP51124 257 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 NRG3P56975 720 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 PRR5P85299 388 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 PLGLB1Q02325 96 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 CAPRIN1Q14444 709 aaKnown RBP7.22□□□□□ -1.25
CCDC40-215ENST00000576033 EIF2S3LQ2VIR3 472 aaKnown RBP7.22□□□□□ -1.25
CCDC40-215ENST00000576033 RABL3Q5HYI8 236 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 DCST1Q5T197 706 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 DCST2Q5T1A1 773 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 ANXA8L1Q5VT79 327 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 NANOGP8Q6NSW7 305 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 LRRC74BQ6ZQY2 392 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 ZNF621Q6ZSS3 439 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 MARCH3Q86UD3 253 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 CALHM3Q86XJ0 350 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 AQP12AQ8IXF9 295 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 GPALPP1Q8IXQ4 340 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 PQLC1Q8N2U9 271 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 RPRMLQ8N4K4 120 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 RNF148Q8N7C7 305 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 ANKFN1Q8N957 763 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 CDRT4Q8N9R6 151 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 C17orf47Q8NEP4 570 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 OR56A1Q8NGH5 318 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 OR5M1Q8NGP8 315 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 OR4C3Q8NH37 302 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 ZFP90Q8TF47 636 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 RNF138Q8WVD3 245 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 PYDC1Q8WXC3 89 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 NR4A3Q92570 626 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 ZNF524Q96C55 264 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 NTNG2Q96CW9 530 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 HSPBAP1Q96EW2 488 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 GNRHR2Q96P88 292 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 PRPF18Q99633 342 aaKnown RBP7.22□□□□□ -1.25
CCDC40-215ENST00000576033 DOHHQ9BU89 302 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 OSBPL11Q9BXB4 747 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 ACTRT3Q9BYD9 372 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 RUBCNLQ9H714 662 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 METTL7AQ9H8H3 244 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 NANOGQ9H9S0 305 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 C3orf14Q9HBI5 128 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 Q9N2J8 555 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 KLRF1Q9NZS2 232 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 ACTR3BQ9P1U1 418 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 SPRR3Q9UBC9 169 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 BTNL2Q9UIR0 455 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 KCNE5Q9UJ90 142 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 RIMS3Q9UJD0 308 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 USP22Q9UPT9 525 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 CFL2Q9Y281 166 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 C15orf41Q9Y2V0 281 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 BAHCC1Q9P281 2608 aa7.22□□□□□ -1.25
CCDC40-215ENST00000576033 TCRBV5S2A0A599 114 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 OR6C70A6NIJ9 312 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 CLDN24A6NM45 220 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 HMGN4O00479 90 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 FCMRO60667 390 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 SLITRK5O94991 958 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 OXSR1O95747 527 aaPredicted RBP7.21□□□□□ -1.26
CCDC40-215ENST00000576033 IL33O95760 270 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 CHRM4P08173 479 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 ALOX5P09917 674 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 ATP6V1B2P21281 511 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 CNR1P21554 472 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 MATN1P21941 496 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 UQCRC2P22695 453 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 VHLP40337 213 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 PRIM2P49643 509 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 MTPNP58546 118 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 DCAF7P61962 342 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 PPIAP62937 165 aaKnown RBP7.21□□□□□ -1.26
CCDC40-215ENST00000576033 POU6F2P78424 691 aaPredicted RBP7.21□□□□□ -1.26
CCDC40-215ENST00000576033 ALDH6A1Q02252 535 aaKnown RBP7.21□□□□□ -1.26
CCDC40-215ENST00000576033 LIPEQ05469 1076 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 ZNHIT3Q15649 155 aaPredicted RBP7.21□□□□□ -1.26
CCDC40-215ENST00000576033 MAPK14Q16539 360 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 SYPL1Q16563 259 aa7.21□□□□□ -1.26
CCDC40-215ENST00000576033 EIPR1Q53HC9 387 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms