RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SULF2Q8IWU5 870 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 PEX5LQ8IYB4 626 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 TNIP2Q8NFZ5 429 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 OR2M7Q8NG81 312 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 TMEM41AQ96HV5 264 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 ZNF597Q96LX8 424 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 FRMD6Q96NE9 622 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 PROK2Q9HC23 129 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 GALNT9Q9HCQ5 603 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 TAS2R1Q9NYW7 299 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 NPIPA5A0A0B4J1W7 369 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 ELOVL7A1L3X0 281 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 AGAP5A6NIR3 686 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 NPIPA7E9PJI5 369 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 SCO2O43819 266 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 PDE9AO76083 593 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 NPIPA8P0DM63 369 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 RPS4Y1P22090 263 aaKnown RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 GSK3BP49841 420 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 GAS1P54826 345 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 GPR85P60893 370 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 KLHL26Q53HC5 615 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 PDZK1Q5T2W1 519 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 CCDC121Q6ZUS5 278 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 IFNEQ86WN2 208 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 MICU2Q8IYU8 434 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 ZNF607Q96SK3 696 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 KCTD14Q9BQ13 255 aaPredicted RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 SPATA5L1Q9BVQ7 753 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 PRPF19Q9UMS4 504 aaKnown RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 BOKQ9UMX3 212 aaPredicted RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 TLN1Q9Y490 2541 aaKnown RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 G3V3Y1 287 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 DBIP07108 87 aaKnown RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 HSD17B1P14061 328 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 ELAVL4P26378 380 aaKnown RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 MASP1P48740 699 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 DNASE1L1P49184 302 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 MEOX1P50221 254 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 PCBP3P57721 371 aaKnown RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 PLEKHN1Q494U1 663 aaPredicted RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 PATL1Q86TB9 770 aaKnown RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 ZNF614Q8N883 585 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 CDRT15Q96T59 188 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 KCNE5Q9UJ90 142 aa15.63■□□□□ 0.09
NUP88-210ENST00000574867 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.63■□□□□ 0.09
NUP88-210ENST00000574867 EML6Q6ZMW3 1958 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 A0A0G2JMM0 328 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 A0A1W2PPB8 328 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 A0A1W2PRS3 328 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 KIR3DP1A8MWS1 328 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 GYG2O15488 501 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 NDUFB5O43674 189 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 TRIM3O75382 744 aaPredicted RBP15.62■□□□□ 0.09
NUP88-210ENST00000574867 RASAL1O95294 804 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 ANGPTL1O95841 491 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 THBS1P07996 1170 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 APOOLQ6UXV4 268 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 MARCH3Q86UD3 253 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 ZFP62Q8NB50 900 aaPredicted RBP15.62■□□□□ 0.09
NUP88-210ENST00000574867 WDR60Q8WVS4 1066 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 SLC7A6OSQ96CW6 309 aaPredicted RBP15.62■□□□□ 0.09
NUP88-210ENST00000574867 QRSL1Q9H0R6 528 aaKnown RBP15.62■□□□□ 0.09
NUP88-210ENST00000574867 PPP4R1LQ9P1A2 415 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 IFT52Q9Y366 437 aa15.62■□□□□ 0.09
NUP88-210ENST00000574867 GPC6Q9Y625 555 aaPredicted RBP15.62■□□□□ 0.09
NUP88-210ENST00000574867 PRORSD1PA6NEY8 169 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 ADAM10O14672 748 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 SNPHO15079 494 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 SERPINB7O75635 380 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 ADH7P40394 386 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 C17orf67Q0P5P2 114 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 FGFBP1Q14512 234 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 MAPK14Q16539 360 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 LIN52Q52LA3 116 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 CMIPQ8IY22 773 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 OR52P1PQ8NH57 321 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 DTNBP1Q96EV8 351 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 BTBD10Q9BSF8 475 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 ZFP64Q9NPA5 681 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.61■□□□□ 0.09
NUP88-210ENST00000574867 TUBA8Q9NY65 449 aaPredicted RBP15.61■□□□□ 0.09
NUP88-210ENST00000574867 SLC35A3Q9Y2D2 325 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 CENPVL1A0A0U1RR11 272 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 SERINC4A6NH21 518 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 SORBS2O94875 1100 aaKnown RBP15.61■□□□□ 0.09
NUP88-210ENST00000574867 NID1P14543 1247 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 IL7RP16871 459 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 HTR1EP28566 365 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 AQP1P29972 269 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 FOXO1Q12778 655 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 LARS2Q15031 903 aaKnown RBP15.61■□□□□ 0.09
NUP88-210ENST00000574867 ZSWIM7Q19AV6 140 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 FNDC7Q5VTL7 733 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 CCDC80Q76M96 950 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 EIF3MQ7L2H7 374 aaKnown RBP15.61■□□□□ 0.09
NUP88-210ENST00000574867 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.61■□□□□ 0.09
NUP88-210ENST00000574867 Q8NA96 180 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 ZG16BQ96DA0 208 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 B4GALT7Q9UBV7 327 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms