RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 TRABD2BA6NFA1 517 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 E7EQ34 232 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 AIPO00170 330 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 KLK1P06870 262 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 C8GP07360 202 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 IDSP22304 550 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TIA1P31483 386 aaKnown RBP eCLIP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 SPAM1P38567 509 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 OCLNQ16625 522 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 GSG1Q2KHT4 349 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 PGBD2Q6P3X8 592 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 PODNL1Q6PEZ8 512 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TMEM91Q6ZNR0 172 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 BTN2A1Q7KYR7 527 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 THOC6Q86W42 341 aaKnown RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 PAQR7Q86WK9 346 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF687Q8N1G0 1237 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 ARL14EPQ8N8R7 260 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 C1orf216Q8TAB5 229 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 SENP5Q96HI0 755 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 P2RY12Q9H244 342 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 CNIH4Q9P003 139 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 GPR160Q9UJ42 338 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 ERVK-19Q9WJR5 959 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TMEM129A0AVI4 362 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 MFSD2BA6NFX1 497 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TUBAL3A6NHL2 446 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 J3QLW9 94 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 SEC14L5O43304 696 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 CLDN11O75508 207 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 HLA-DQB1P01920 261 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 RLN2P04090 185 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 NMBP08949 121 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF19P17023 458 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 PXNP49023 591 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 MVDP53602 400 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF763Q0D2J5 394 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 PAN3Q58A45 887 aaKnown RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TPGS2Q68CL5 300 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 RAB12Q6IQ22 244 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 SFXN4Q6P4A7 337 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TSEN54Q7Z6J9 526 aaKnown RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 BVESQ8NE79 360 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TMEM159Q96B96 161 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 MFFQ9GZY8 342 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 SMG9Q9H0W8 520 aaKnown RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 EVA1AQ9H8M9 152 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TRIM36Q9NQ86 728 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TAS2R10Q9NYW0 307 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 FBXW2Q9UKT8 454 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 DYRK1BQ9Y463 629 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 CSNK1G3Q9Y6M4 447 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TCF20Q9UGU0 1960 aaKnown RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 OR14I1A6ND48 311 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 FAM183AA6NL82 134 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 OR2AG2A6NM03 316 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 ANHXE9PGG2 379 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 TO15178 435 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 ACRP10323 421 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 AOAHP28039 575 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 RPL3P39023 403 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 GDNFP39905 211 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 CTSOP43234 321 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 LIMK1P53667 647 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 CRYBA2P53672 197 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 RAP2BP61225 183 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 NDUFA9Q16795 377 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 LRRC37A5PQ49AS3 106 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF697Q5TEC3 545 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 PRAMEF13Q5VWM6 474 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 MED27Q6P2C8 311 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 SERPINA12Q8IW75 414 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 FAM26EQ8N5C1 309 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 PLA2G15Q8NCC3 412 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 THAP6Q8TBB0 222 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 WDR20Q8TBZ3 569 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 EXOSC8Q96B26 276 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 ARMC5Q96C12 935 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 KCNJ15Q99712 375 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 DPH7Q9BTV6 452 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 WRAP53Q9BUR4 548 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF471Q9BX82 626 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 RNF32Q9H0A6 362 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 TMEM185BQ9H7F4 350 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 SLC6A20Q9NP91 592 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 CYSLTR2Q9NS75 346 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 AP1M2Q9Y6Q5 423 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 H7C0S8 307 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 CATP04040 527 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 MRPL3P09001 348 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 PPP3CBP16298 524 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 FGF9P31371 208 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 TRIM23P36406 574 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 HOXA1P49639 335 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 LIM2P55344 173 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 POLR2GP62487 172 aaKnown RBP eCLIP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 HTRA4P83105 476 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 ZXDCQ2QGD7 858 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 LRRC73Q5JTD7 316 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 FAM74A1Q5RGS3 127 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms