RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TP53BP1Q12888 1972 aaPredicted RBP13.48□□□□□ -0.25
SMG6-215ENST00000574501 FOXE1O00358 373 aaPredicted RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 SUSD5O60279 629 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 CATP04040 527 aaKnown RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 HTR1FP30939 366 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 AHRP35869 848 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 ACVR1BP36896 505 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 SPINT3P49223 89 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 STXBP1P61764 594 aaKnown RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 PIP5KL1Q5T9C9 394 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 SLC22A10Q63ZE4 541 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 RPTNQ6XPR3 784 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 SLITRK4Q8IW52 837 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 CMIPQ8IY22 773 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 LRRC56Q8IYG6 542 aaPredicted RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 TMEM99Q8N816 258 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 DCAF4L2Q8NA75 395 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 OR1S1Q8NH92 325 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 GNPDA2Q8TDQ7 276 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 ZNF480Q8WV37 535 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 EXOSC8Q96B26 276 aaKnown RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 TMEM159Q96B96 161 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 PRRC1Q96M27 445 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 C12orf57Q99622 126 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 TIMP4Q99727 224 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMG6-215ENST00000574501 EVA1AQ9H8M9 152 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 NPDC1Q9NQX5 325 aaPredicted RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 NTMQ9P121 344 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 ICKQ9UPZ9 632 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 PCDHGA9Q9Y5G4 932 aaKnown RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 BACE2Q9Y5Z0 518 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 OR6C75A6NL08 312 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 CPSF4LA6NMK7 179 aaKnown RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 SELENOFO60613 162 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 GPR4P46093 362 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 CCR8P51685 355 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 EPHA4P54764 986 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 TAS2R41P59536 307 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 PSMA6P60900 246 aaKnown RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 OC90Q02509 493 aaPredicted RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 RTP2Q5QGT7 225 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 PAQR7Q86WK9 346 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 FBXO22Q8NEZ5 403 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 GANCQ8TET4 914 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 SCARB1Q8WTV0 552 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 SMAP2Q8WU79 429 aaPredicted RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 MRPS24Q96EL2 167 aaKnown RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 ZNF304Q9HCX3 659 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 HINT3Q9NQE9 182 aaKnown RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 SIRT3Q9NTG7 399 aaPredicted RBP13.47□□□□□ -0.25
SMG6-215ENST00000574501 HCSTQ9UBK5 93 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 CLEC4EQ9ULY5 219 aa13.47□□□□□ -0.25
SMG6-215ENST00000574501 OR5K4A6NMS3 321 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 RP2O75695 350 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 TGM6O95932 706 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 IGSF6O95976 241 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 GALP22466 123 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 CTSCP53634 463 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 SHC2P98077 582 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 PITPNAQ00169 270 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 TSPAN31Q12999 210 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 FAAP20Q6NZ36 180 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 CDC73Q6P1J9 531 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 PRSS55Q6UWB4 352 aaPredicted RBP13.46□□□□□ -0.25
SMG6-215ENST00000574501 ZNF783Q6ZMS7 281 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 RTN4RL1Q86UN2 441 aaPredicted RBP13.46□□□□□ -0.25
SMG6-215ENST00000574501 LINC00471Q8N535 108 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 C2orf73Q8N5S3 287 aaPredicted RBP13.46□□□□□ -0.25
SMG6-215ENST00000574501 MEIOBQ8N635 442 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 C17orf47Q8NEP4 570 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 ABHD4Q8TB40 342 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 SORCS1Q8WY21 1168 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 SMPDL3AQ92484 453 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 LRRC46Q96FV0 321 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 LYSMD1Q96S90 227 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 SLC38A3Q99624 504 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 C19orf43Q9BQ61 176 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 ARL6Q9H0F7 186 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 B4GALT6Q9UBX8 382 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 CA5BQ9Y2D0 317 aa13.46□□□□□ -0.25
SMG6-215ENST00000574501 ADAM12O43184 909 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 B3GALNT1O75752 331 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 C1GALT1C1LP0DN25 315 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 ATF1P18846 271 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 ANXA7P20073 488 aaKnown RBP13.45□□□□□ -0.26
SMG6-215ENST00000574501 S100A11P31949 105 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 PRKAG1P54619 331 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 FLI1Q01543 452 aaPredicted RBP13.45□□□□□ -0.26
SMG6-215ENST00000574501 COL9A2Q14055 689 aaPredicted RBP13.45□□□□□ -0.26
SMG6-215ENST00000574501 FGL2Q14314 439 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 GNA13Q14344 377 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 PLBD1Q6P4A8 553 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 ACBD7Q8N6N7 88 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 OR5P2Q8WZ92 322 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 P2RX2Q9UBL9 471 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 PRKAG2Q9UGJ0 569 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 DYRK1BQ9Y463 629 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 D6RAR5 112 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms