RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 TRIM3O75382 744 aaPredicted RBP3.01□□□□□ -1.93
CDC27-216ENST00000574304 CHRNA1P02708 482 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 SLC4A1P02730 911 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 GSTT2P0CG29 244 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 GSTT2BP0CG30 244 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 PSG2P11465 335 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 IGLL1P15814 213 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 HSPA1LP34931 641 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 GNPDA1P46926 289 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 CCDC40Q4G0X9 1142 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 RABEPKQ7Z6M1 372 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 DCAF4L2Q8NA75 395 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 MSANTD4Q8NCY6 345 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 TAF4BQ92750 862 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 NFKBIZQ9BYH8 718 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 COMMD4Q9H0A8 199 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 TMEM231Q9H6L2 316 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 COG4Q9H9E3 785 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 FANCFQ9NPI8 374 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 ZNF331Q9NQX6 463 aaPredicted RBP3.01□□□□□ -1.93
CDC27-216ENST00000574304 CDC42BPBQ9Y5S2 1711 aa3.01□□□□□ -1.93
CDC27-216ENST00000574304 CFAP73A6NFT4 308 aa3□□□□□ -1.93
CDC27-216ENST00000574304 RSPH10B2B2RC85 870 aa3□□□□□ -1.93
CDC27-216ENST00000574304 BBOX1O75936 387 aa3□□□□□ -1.93
CDC27-216ENST00000574304 RSPH10BP0C881 870 aa3□□□□□ -1.93
CDC27-216ENST00000574304 BCKDHAP12694 445 aa3□□□□□ -1.93
CDC27-216ENST00000574304 H2AFXP16104 143 aaPredicted RBP3□□□□□ -1.93
CDC27-216ENST00000574304 HOXD10P28358 340 aa3□□□□□ -1.93
CDC27-216ENST00000574304 SFNP31947 248 aa3□□□□□ -1.93
CDC27-216ENST00000574304 NOVA1P51513 510 aaKnown RBP3□□□□□ -1.93
CDC27-216ENST00000574304 TIMM10P62072 90 aa3□□□□□ -1.93
CDC27-216ENST00000574304 FUT7Q11130 342 aa3□□□□□ -1.93
CDC27-216ENST00000574304 MPPED2Q15777 294 aa3□□□□□ -1.93
CDC27-216ENST00000574304 PVRIGQ6DKI7 326 aa3□□□□□ -1.93
CDC27-216ENST00000574304 OR6B2Q6IFH4 312 aa3□□□□□ -1.93
CDC27-216ENST00000574304 IRGCQ6NXR0 463 aa3□□□□□ -1.93
CDC27-216ENST00000574304 ZCCHC12Q6PEW1 402 aa3□□□□□ -1.93
CDC27-216ENST00000574304 HSD11B1LQ7Z5J1 315 aa3□□□□□ -1.93
CDC27-216ENST00000574304 C17orf82Q86X59 251 aaPredicted RBP3□□□□□ -1.93
CDC27-216ENST00000574304 ZNF433Q8N7K0 673 aaPredicted RBP3□□□□□ -1.93
CDC27-216ENST00000574304 ZBTB44Q8NCP5 570 aa3□□□□□ -1.93
CDC27-216ENST00000574304 OR2T33Q8NG76 320 aa3□□□□□ -1.93
CDC27-216ENST00000574304 DQX1Q8TE96 717 aaKnown RBP3□□□□□ -1.93
CDC27-216ENST00000574304 TRUB1Q8WWH5 349 aaKnown RBP3□□□□□ -1.93
CDC27-216ENST00000574304 DCUN1D4Q92564 292 aa3□□□□□ -1.93
CDC27-216ENST00000574304 NCLNQ969V3 563 aa3□□□□□ -1.93
CDC27-216ENST00000574304 NSMCE2Q96MF7 247 aa3□□□□□ -1.93
CDC27-216ENST00000574304 RUFY1Q96T51 708 aa3□□□□□ -1.93
CDC27-216ENST00000574304 TMEM121Q9BTD3 319 aa3□□□□□ -1.93
CDC27-216ENST00000574304 SLC25A39Q9BZJ4 359 aaPredicted RBP3□□□□□ -1.93
CDC27-216ENST00000574304 ATG10Q9H0Y0 220 aa3□□□□□ -1.93
CDC27-216ENST00000574304 GPN2Q9H9Y4 310 aaPredicted RBP3□□□□□ -1.93
CDC27-216ENST00000574304 C1orf123Q9NWV4 160 aa3□□□□□ -1.93
CDC27-216ENST00000574304 CNOT2Q9NZN8 540 aaKnown RBP3□□□□□ -1.93
CDC27-216ENST00000574304 CD274Q9NZQ7 290 aa3□□□□□ -1.93
CDC27-216ENST00000574304 FETUBQ9UGM5 382 aa3□□□□□ -1.93
CDC27-216ENST00000574304 LCMT1Q9UIC8 334 aa3□□□□□ -1.93
CDC27-216ENST00000574304 KLK12Q9UKR0 248 aa3□□□□□ -1.93
CDC27-216ENST00000574304 PLA2G4CQ9UP65 541 aa3□□□□□ -1.93
CDC27-216ENST00000574304 LGALS8O00214 317 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 ANXA4P09525 319 aaPredicted RBP2.99□□□□□ -1.93
CDC27-216ENST00000574304 NTSP30990 170 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 GCKP35557 465 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 CDKN3Q16667 212 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 OR8G2PQ6IF36 304 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 DNM1P46Q6ZS02 220 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 SKA3Q8IX90 412 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 ZSCAN4Q8NAM6 433 aaPredicted RBP2.99□□□□□ -1.93
CDC27-216ENST00000574304 OR9A1PQ8NGU1 263 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 FBXO30Q8TB52 745 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 C7orf33Q8WU49 177 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 SLC35E1Q96K37 410 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 XPO4Q9C0E2 1151 aaKnown RBP2.99□□□□□ -1.93
CDC27-216ENST00000574304 RPAP3Q9H6T3 665 aaPredicted RBP2.99□□□□□ -1.93
CDC27-216ENST00000574304 NAP1L2Q9ULW6 460 aaPredicted RBP2.99□□□□□ -1.93
CDC27-216ENST00000574304 SMC3Q9UQE7 1217 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 USP16Q9Y5T5 823 aa2.99□□□□□ -1.93
CDC27-216ENST00000574304 IGHV1OR15-1A0A075B7D0 117 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 RNF222A6NCQ9 220 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 USP27XA6NNY8 438 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 WASHC1A8K0Z3 465 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 BCAS2O75934 225 aaPredicted RBP2.98□□□□□ -1.93
CDC27-216ENST00000574304 SUPT7LO94864 414 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 XRCC1P18887 633 aaPredicted RBP2.98□□□□□ -1.93
CDC27-216ENST00000574304 KIR2DS2P43631 304 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 DAZ2Q13117 558 aaKnown RBP2.98□□□□□ -1.93
CDC27-216ENST00000574304 PDIA5Q14554 519 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 ZNF630Q2M218 657 aaPredicted RBP2.98□□□□□ -1.93
CDC27-216ENST00000574304 CFAP221Q4G0U5 840 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 TMEM52BQ4KMG9 183 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 AGBL2Q5U5Z8 902 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 SCYL2Q6P3W7 929 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 TMEM184AQ6ZMB5 413 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 CYS1Q717R9 158 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 LPCAT2Q7L5N7 544 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 LRRC70Q7Z2Q7 622 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 ANKRD20A12PQ8NF67 263 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 OR2AP1Q8NGE2 309 aa2.98□□□□□ -1.93
CDC27-216ENST00000574304 IL1F10Q8WWZ1 152 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms