RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 MAP3K8P41279 467 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 TPD52P55327 224 aaPredicted RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 DSCR4P56555 118 aaPredicted RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 ABCE1P61221 599 aaKnown RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 EEF1A1P68104 462 aaKnown RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 PRR5P85299 388 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 FOXF2Q12947 444 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 MPP2Q14168 576 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 MLC1Q15049 377 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 CPTPQ5TA50 214 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 EEF1A1P5Q5VTE0 462 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 ZCCHC12Q6PEW1 402 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 ARSKQ6UWY0 536 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 GRAMD2AQ8IUY3 354 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 ANKRD42Q8N9B4 389 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 SLC16A11Q8NCK7 471 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 OR5AK3PQ8NH89 298 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 ZPLD1Q8TCW7 415 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 DUSP19Q8WTR2 217 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 NRGNQ92686 78 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 HOXB13Q92826 284 aaPredicted RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 RNASE6Q93091 150 aaKnown RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 INTS12Q96CB8 462 aaKnown RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 ZNF837Q96EG3 531 aaPredicted RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 C1GALT1C1Q96EU7 318 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 PAIP2Q9BPZ3 127 aaKnown RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 C20orf27Q9GZN8 174 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 CXorf36Q9H7Y0 433 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 CALHM2Q9HA72 323 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 KCNK9Q9NPC2 374 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 FBXO34Q9NWN3 711 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 GIN1Q9NXP7 522 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 CRIM1Q9NZV1 1036 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 NTMQ9P121 344 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 CLCF1Q9UBD9 225 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 KCNN3Q9UGI6 736 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 ANKRD17O75179 2603 aaKnown RBP9.02□□□□□ -0.96
RPA1-206ENST00000573994 NPIPA5A0A0B4J1W7 369 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 A0A1W2PRB8 838 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 OR2M5A3KFT3 312 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 NPIPA7E9PJI5 369 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 H3BML4 177 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 LINC01387J3KSC0 135 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 TM9SF1O15321 606 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 BIRC5O15392 142 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 KCNK2O95069 426 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 TGM6O95932 706 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 HMGN2P05204 90 aaKnown RBP9.02□□□□□ -0.97
RPA1-206ENST00000573994 ALOX5P09917 674 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 DHRS4L1P0CG22 281 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 NPIPA8P0DM63 369 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 CHMP24386 653 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 CTSSP25774 331 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 LCN1P31025 176 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 KIR2DL3P43628 341 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 PRIM2P49643 509 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 MAD2L1Q13257 205 aaPredicted RBP9.02□□□□□ -0.97
RPA1-206ENST00000573994 TP53BP2Q13625 1128 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 GANABQ14697 944 aaKnown RBP9.02□□□□□ -0.97
RPA1-206ENST00000573994 BCL2A1Q16548 175 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 SMU1Q2TAY7 513 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 ADGRE4PQ86SQ3 457 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 LUZP2Q86TE4 346 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 OR4C3Q8NH37 302 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 GOT1L1Q8NHS2 421 aaPredicted RBP9.02□□□□□ -0.97
RPA1-206ENST00000573994 MGARPQ8TDB4 240 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 CDS1Q92903 461 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 SH3YL1Q96HL8 342 aaPredicted RBP9.02□□□□□ -0.97
RPA1-206ENST00000573994 ZFP3Q96NJ6 502 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 SORT1Q99523 831 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 PRPF18Q99633 342 aaKnown RBP9.02□□□□□ -0.97
RPA1-206ENST00000573994 KLHDC3Q9BQ90 382 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 PTGES2Q9H7Z7 377 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 AKTIPQ9H8T0 292 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 ATAD3AQ9NVI7 634 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 FOXD3Q9UJU5 478 aaPredicted RBP9.02□□□□□ -0.97
RPA1-206ENST00000573994 EIF3LQ9Y262 564 aaKnown RBP9.02□□□□□ -0.97
RPA1-206ENST00000573994 VDAC3Q9Y277 283 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 ACTL7BQ9Y614 415 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 SPG11Q96JI7 2443 aa9.02□□□□□ -0.97
RPA1-206ENST00000573994 SLC22A20A6NK97 555 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 SYT5O00445 386 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 CFLARO15519 480 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 IL18BPO95998 194 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 MYZAPP0CAP1 466 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 PRPS1L1P21108 318 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 OPRM1P35372 400 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 CPOXP36551 454 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 CPA2P48052 419 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 SLC1A6P48664 564 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 DIO3P55073 304 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 CLDN15P56746 228 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 CLDN20P56880 219 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 RPS26P62854 115 aaKnown RBP9.01□□□□□ -0.97
RPA1-206ENST00000573994 POU6F2P78424 691 aaPredicted RBP9.01□□□□□ -0.97
RPA1-206ENST00000573994 POU4F2Q12837 409 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 CD226Q15762 336 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.01□□□□□ -0.97
RPA1-206ENST00000573994 PGS1Q32NB8 556 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 FBXL19-AS1Q494R0 122 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms