RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	TRIM25	Q14258	630 aa	Known RBP	13.16	□□□□□ -0.3
ABR-223	ENST00000573895	SLC10A1	Q14973	349 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	EXOSC7	Q15024	291 aa	Known RBP	13.16	□□□□□ -0.3
ABR-223	ENST00000573895	CDC73	Q6P1J9	531 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	ANGPTL8	Q6UXH0	198 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	NUP54	Q7Z3B4	507 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	NET1	Q7Z628	596 aa	Predicted RBP	13.16	□□□□□ -0.3
ABR-223	ENST00000573895	ULK2	Q8IYT8	1036 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	SLC34A3	Q8N130	599 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	CLEC4F	Q8N1N0	589 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	TMEM251	Q8N6I4	163 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	CDRT4	Q8N9R6	151 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	OR52R1	Q8NGF1	315 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	SPPL2A	Q8TCT8	520 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.16	□□□□□ -0.3
ABR-223	ENST00000573895	NTNG2	Q96CW9	530 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	REXO5	Q96IC2	774 aa	Known RBP	13.16	□□□□□ -0.3
ABR-223	ENST00000573895	SLC35G5	Q96KT7	338 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.16	□□□□□ -0.3
ABR-223	ENST00000573895	NXF5	Q9H1B4	397 aa	Known RBP	13.16	□□□□□ -0.3
ABR-223	ENST00000573895	DEFB127	Q9H1M4	99 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	ALG2	Q9H553	416 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	IKZF5	Q9H5V7	419 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	ZFP64	Q9NPA5	681 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	DTX4	Q9Y2E6	619 aa		13.16	□□□□□ -0.3
ABR-223	ENST00000573895	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	FRG2C	A6NGY1	282 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	FAM166B	A8MTA8	275 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	FAM220BP	B1ANY3	271 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	CDC40	O60508	579 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
ABR-223	ENST00000573895	HCN1	O60741	890 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	TRIM3	O75382	744 aa	Predicted RBP	13.15	□□□□□ -0.3
ABR-223	ENST00000573895	GMNN	O75496	209 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	TNFRSF21	O75509	655 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	PPM1B	O75688	479 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	CIB2	O75838	187 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	STAMBP	O95630	424 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	MAGEA5	P43359	124 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	GSK3B	P49841	420 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	KHK	P50053	298 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	GZMM	P51124	257 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	FBXW4	P57775	412 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	DSTN	P60981	165 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	KCNJ2	P63252	427 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	VEZF1	Q14119	521 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	GNA13	Q14344	377 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	ZNHIT3	Q15649	155 aa	Predicted RBP	13.15	□□□□□ -0.3
ABR-223	ENST00000573895	CYP51A1	Q16850	503 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
ABR-223	ENST00000573895	MFSD12	Q6NUT3	480 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	TRIL	Q7L0X0	811 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	SZRD1	Q7Z422	152 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	MRGPRG	Q86SM5	289 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	SLC30A8	Q8IWU4	369 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	OR2T12	Q8NG77	320 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	ADAMTS15	Q8TE58	950 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	DIO2	Q92813	273 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	HOXB13	Q92826	284 aa	Predicted RBP	13.15	□□□□□ -0.3
ABR-223	ENST00000573895	GIMAP5	Q96F15	307 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	BTBD9	Q96Q07	612 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	DMRTA2	Q96SC8	542 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	DOHH	Q9BU89	302 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	ITPA	Q9BY32	194 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	ANGPTL4	Q9BY76	406 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	TP63	Q9H3D4	680 aa	Predicted RBP	13.15	□□□□□ -0.3
ABR-223	ENST00000573895	TMEM38A	Q9H6F2	299 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.15	□□□□□ -0.3
ABR-223	ENST00000573895	ACKR4	Q9NPB9	350 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	B4GALT7	Q9UBV7	327 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	SH3BGRL2	Q9UJC5	107 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	LIPT1	Q9Y234	373 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.15	□□□□□ -0.3
ABR-223	ENST00000573895	ADGRG4	Q8IZF6	3080 aa		13.15	□□□□□ -0.3
ABR-223	ENST00000573895	ELOVL7	A1L3X0	281 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	TMEM247	A6NEH6	219 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	AQP7	O14520	342 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	ADAM10	O14672	748 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	BCKDK	O14874	412 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	ABCB7	O75027	752 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	TPO	P07202	933 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	ALOX5	P09917	674 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	MAP3K8	P41279	467 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	CASP3	P42574	277 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	MAN2A2	P49641	1150 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	ADORA2A-AS1	P86434	159 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	SNTA1	Q13424	505 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	LASP1	Q14847	261 aa	Known RBP	13.14	□□□□□ -0.31
ABR-223	ENST00000573895	FXN	Q16595	210 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	ZNF630	Q2M218	657 aa	Predicted RBP	13.14	□□□□□ -0.31
ABR-223	ENST00000573895	COX20	Q5RI15	118 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	EXOSC6	Q5RKV6	272 aa	Known RBP	13.14	□□□□□ -0.31
ABR-223	ENST00000573895	GCNT6	Q5T4J0	391 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	ATAD3B	Q5T9A4	648 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	PRAMEF20	Q5VT98	475 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	PACS2	Q86VP3	889 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	IFNE	Q86WN2	208 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	C10orf67	Q8IYJ2	551 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	MICU2	Q8IYU8	434 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	C11orf65	Q8NCR3	313 aa		13.14	□□□□□ -0.31
ABR-223	ENST00000573895	SIMC1	Q8NDZ2	872 aa		13.14	□□□□□ -0.31

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