RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 PACS2Q86VP3 889 aa13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 NUP43Q8NFH3 380 aa13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 NTNG2Q96CW9 530 aa13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 SPDL1Q96EA4 605 aa13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 PANX1Q96RD7 426 aa13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 UGT2B28Q9BY64 529 aa13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 SAR1AQ9NR31 198 aa13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 DLL4Q9NR61 685 aa13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 ZCCHC3Q9NUD5 404 aaKnown RBP13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 BTNL2Q9UIR0 455 aa13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 C19orf53Q9UNZ5 99 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-207ENST00000572346 MBD3L4A6NDZ8 208 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 MBD3L3A6NE82 208 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 TUBAL3A6NHL2 446 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 MBD3L5A6NJ08 208 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 CD8B2A6NJW9 211 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 UPK1AO00322 258 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 SHOX2O60902 331 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 SCN2BO60939 215 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 FAM107AO95990 144 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 IFI6P09912 130 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 BMP7P18075 431 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 CCT3P49368 545 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 AGFG1P52594 562 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 HBA1P69905 142 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 ADAM8P78325 824 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 RPP38P78345 283 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 TOMM20Q15388 145 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 ZNHIT3Q15649 155 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 EIPR1Q53HC9 387 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 WIPI1Q5MNZ9 446 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 C6orf10Q5SRN2 563 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 DCST1Q5T197 706 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 GKAP1Q5VSY0 366 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 BHLHB9Q6PI77 547 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 BLOC1S3Q6QNY0 202 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 PAMR1Q6UXH9 720 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 MSANTD1Q6ZTZ1 278 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 MTERF4Q7Z6M4 381 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 PIGWQ7Z7B1 504 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 FUNDC1Q8IVP5 155 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 PRR22Q8IZ63 422 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 OR2L13Q8N349 312 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 TRIML2Q8N7C3 387 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 SIMC1Q8NDZ2 872 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 C17orf47Q8NEP4 570 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 MBD3L2Q8NHZ7 208 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 VPS33AQ96AX1 596 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 MOAP1Q96BY2 351 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 MBD6Q96DN6 1003 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 WDYHV1Q96HA8 205 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 TMEM41AQ96HV5 264 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 ITCHQ96J02 903 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 TRIB1Q96RU8 372 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 GSX1Q9H4S2 264 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 ZNF385DQ9H6B1 395 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 CXorf36Q9H7Y0 433 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 EQTNQ9NQ60 294 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 ARL2BPQ9Y2Y0 163 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 CAPN7Q9Y6W3 813 aa13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 FLNAP21333 2647 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-207ENST00000572346 RFXANKO14593 260 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 GNB5O14775 395 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 ANGPT2O15123 496 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 EPXP11678 715 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 CTSSP25774 331 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 ABCD3P28288 659 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 PTPN6P29350 595 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 ADSLP30566 484 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 SOX18P35713 384 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 PRIM2P49643 509 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 EMDP50402 254 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 DCAF7P61962 342 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 KLF10Q13118 480 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 TP53BP2Q13625 1128 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 RCAN2Q14206 197 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 MAPRE2Q15555 327 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 VPS26BQ4G0F5 336 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 FBXW10Q5XX13 1052 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 TIGD3Q6B0B8 471 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 ZNF621Q6ZSS3 439 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 KIF18BQ86Y91 864 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 OR56A1Q8NGH5 318 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 OR5AK3PQ8NH89 298 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 LINC01560Q8TB33 94 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 SFXN5Q8TD22 340 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 ABTB1Q969K4 478 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 FAM120BQ96EK7 910 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 CCDC115Q96NT0 180 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 MS4A4EQ96PG1 132 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 ITPAQ9BY32 194 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 NMUR2Q9GZQ4 415 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 NXF5Q9H1B4 397 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 FOLH1BQ9HBA9 442 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 SIRT3Q9NTG7 399 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 JKAMPQ9P055 326 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 DTX4Q9Y2E6 619 aa13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 RPH3AQ9Y2J0 694 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-207ENST00000572346 RNF103-CHMP3A0A140T963 221 aa13.44□□□□□ -0.26
NPLOC4-207ENST00000572346 EEF1E1-BLOC1S5C9J1V9 151 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms