RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 POU4F3Q15319 338 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 CHI3L2Q15782 390 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 BCL2A1Q16548 175 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.31□□□□□ -0.44
PRPF8-202ENST00000571346 C6orf136Q5SQH8 315 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 IL23RQ5VWK5 629 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 VWA1Q6PCB0 445 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 CDC20BQ86Y33 519 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 NUDCD3Q8IVD9 361 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 MREGQ8N565 214 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 KRTCAP2Q8N6L1 136 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 FNDC9Q8TBE3 224 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 FIG4Q92562 907 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 HOXB13Q92826 284 aaPredicted RBP12.31□□□□□ -0.44
PRPF8-202ENST00000571346 CDS1Q92903 461 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 ZNF845Q96IR2 970 aaPredicted RBP12.31□□□□□ -0.44
PRPF8-202ENST00000571346 LIME1Q9H400 295 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 NTMQ9P121 344 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 ST6GALNAC2Q9UJ37 374 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 EIF3LQ9Y262 564 aaKnown RBP12.31□□□□□ -0.44
PRPF8-202ENST00000571346 PLEKHA6Q9Y2H5 1048 aa12.31□□□□□ -0.44
PRPF8-202ENST00000571346 ZNF469Q96JG9 3925 aaPredicted RBP12.31□□□□□ -0.44
PRPF8-202ENST00000571346 IGLV3-32A0A0A0MS00 114 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 ALG1L2C9J202 215 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 LINC01387J3KSC0 135 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 EIF1AYO14602 144 aaKnown RBP12.3□□□□□ -0.44
PRPF8-202ENST00000571346 CFLARO15519 480 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 CTIFO43310 598 aaKnown RBP12.3□□□□□ -0.44
PRPF8-202ENST00000571346 TNFSF13O75888 250 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 C6orf47O95873 294 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 EPXP11678 715 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 CD1EP15812 388 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 ZNF17P17021 662 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 ATP6V1C1P21283 382 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 TBXA2RP21731 343 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 MAP3K8P41279 467 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 ETV4P43268 484 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 EIF1AXP47813 144 aaKnown RBP12.3□□□□□ -0.44
PRPF8-202ENST00000571346 SUCLG1P53597 346 aaKnown RBP12.3□□□□□ -0.44
PRPF8-202ENST00000571346 IST1P53990 364 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 MLC1Q15049 377 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 SGCBQ16585 318 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 SPNS3Q6ZMD2 512 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 OR56A1Q8NGH5 318 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 OR6Y1Q8NGX8 325 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 OR4C3Q8NH37 302 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 OR5AK3PQ8NH89 298 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 NUDT8Q8WV74 236 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 PRPF18Q99633 342 aaKnown RBP12.3□□□□□ -0.44
PRPF8-202ENST00000571346 BTBD2Q9BX70 525 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 TMEM185BQ9H7F4 350 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 CXorf36Q9H7Y0 433 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 NEUROD4Q9HD90 331 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 CCM2LQ9NUG4 571 aaPredicted RBP12.3□□□□□ -0.44
PRPF8-202ENST00000571346 FBXO34Q9NWN3 711 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 GIN1Q9NXP7 522 aa12.3□□□□□ -0.44
PRPF8-202ENST00000571346 FAF1Q9UNN5 650 aaPredicted RBP12.3□□□□□ -0.44
PRPF8-202ENST00000571346 NPIPA5A0A0B4J1W7 369 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 SH3D21A4FU49 640 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 NPIPA7E9PJI5 369 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 SERPINE1P05121 402 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 NGFRP08138 427 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 NPIPA8P0DM63 369 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 G6PDP11413 515 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 FCGR2AP12318 317 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 PRPS1L1P21108 318 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 DNASE1P24855 282 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 KCNJ5P48544 419 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 CLDN15P56746 228 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 EEF1A1P68104 462 aaKnown RBP12.29□□□□□ -0.44
PRPF8-202ENST00000571346 PGS1Q32NB8 556 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 CEP85LQ5SZL2 805 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 EEF1A1P5Q5VTE0 462 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 ZCCHC12Q6PEW1 402 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 ZNF614Q8N883 585 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 ZNF781Q8N8C0 355 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 OR5P2Q8WZ92 322 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 NINJ1Q92982 152 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 STACQ99469 402 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 TMEM109Q9BVC6 243 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 PARD6BQ9BYG5 372 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 PRRG4Q9BZD6 226 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 OPN3Q9H1Y3 402 aaPredicted RBP12.29□□□□□ -0.44
PRPF8-202ENST00000571346 HHATLQ9HCP6 504 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 UBQLN4Q9NRR5 601 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 DUSP22Q9NRW4 184 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 ZNF175Q9Y473 711 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 AP4B1Q9Y6B7 739 aa12.29□□□□□ -0.44
PRPF8-202ENST00000571346 ITPR3Q14573 2671 aa12.28□□□□□ -0.44
PRPF8-202ENST00000571346 A0A087WZY1 265 aa12.28□□□□□ -0.44
PRPF8-202ENST00000571346 A8MXE2 369 aa12.28□□□□□ -0.44
PRPF8-202ENST00000571346 MSTNO14793 375 aa12.28□□□□□ -0.44
PRPF8-202ENST00000571346 ITM2AO43736 263 aa12.28□□□□□ -0.44
PRPF8-202ENST00000571346 NUDT14O95848 222 aa12.28□□□□□ -0.44
PRPF8-202ENST00000571346 PLGP00747 810 aaPredicted RBP12.28□□□□□ -0.44
PRPF8-202ENST00000571346 OPN1LWP04000 364 aa12.28□□□□□ -0.44
PRPF8-202ENST00000571346 CRHP06850 196 aa12.28□□□□□ -0.44
PRPF8-202ENST00000571346 KRT16P08779 473 aa12.28□□□□□ -0.44
PRPF8-202ENST00000571346 ME2P23368 584 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms