RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 DEPPQ9NTK1 212 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 GIN1Q9NXP7 522 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 MRTO4Q9UKD2 239 aaKnown RBP12.16□□□□□ -0.46
CCDC40-205ENST00000571028 KLF13Q9Y2Y9 288 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-205ENST00000571028 PCDHB14Q9Y5E9 798 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 CPAMD8Q8IZJ3 1885 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 MAP1AP78559 2803 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-205ENST00000571028 A0A096LPI6 279 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 SCO2O43819 266 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 HS6ST1O60243 411 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 TSPAN2O60636 221 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 FAM107AO95990 144 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 CYP4B1P13584 511 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 NAGAP17050 411 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 CNR1P21554 472 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 KHKP50053 298 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 RNF144AP50876 292 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-205ENST00000571028 KCNJ2P63252 427 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 ADAM8P78325 824 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 PLGLB1Q02325 96 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 CYLC2Q14093 348 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-205ENST00000571028 CAPRIN1Q14444 709 aaKnown RBP12.15□□□□□ -0.46
CCDC40-205ENST00000571028 MAPRE2Q15555 327 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 NTRK2Q16620 822 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 COX20Q5RI15 118 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 GKAP1Q5VSY0 366 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-205ENST00000571028 NUP54Q7Z3B4 507 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 C16orf62Q7Z3J2 963 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 FGD2Q7Z6J4 655 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 DHDDSQ86SQ9 333 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 CHERPQ8IWX8 916 aaKnown RBP12.15□□□□□ -0.46
CCDC40-205ENST00000571028 MARVELD2Q8N4S9 558 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 GOLM1Q8NBJ4 401 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 POGLUT1Q8NBL1 392 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 ZFP90Q8TF47 636 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 NANOS1Q8WY41 292 aaKnown RBP12.15□□□□□ -0.46
CCDC40-205ENST00000571028 HGDQ93099 445 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 TMCO6Q96DC7 493 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 NEURL3Q96EH8 262 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 BTBD2Q9BX70 525 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 TPT1P8Q9HAU6 139 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 TMEM45AQ9NWC5 275 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 FBXO34Q9NWN3 711 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 KLRF1Q9NZS2 232 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 FLRT3Q9NZU0 649 aa12.15□□□□□ -0.46
CCDC40-205ENST00000571028 CNOT11Q9UKZ1 510 aaKnown RBP12.15□□□□□ -0.46
CCDC40-205ENST00000571028 CHCHD2Q9Y6H1 151 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-205ENST00000571028 NPIPA5A0A0B4J1W7 369 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 PINLYPA6NC86 204 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 DUXAA6NLW8 204 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 FAM166BA8MTA8 275 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 NPIPA7E9PJI5 369 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 KLRC4-KLRK1H3BQV0 150 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 CLIC1O00299 241 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 FBP2O00757 339 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 MRASO14807 208 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 SHOX2O60902 331 aaPredicted RBP12.14□□□□□ -0.47
CCDC40-205ENST00000571028 ICOSLGO75144 302 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 CTAG2O75638 210 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 KCNK2O95069 426 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 UTS2O95399 124 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 IL33O95760 270 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 ZCCHC18P0CG32 403 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 NPIPA8P0DM63 369 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 ATP6V1C1P21283 382 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 MAP3K8P41279 467 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 MASP1P48740 699 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 MAN2A2P49641 1150 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 PNLIPRP2P54317 469 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 PSMD4P55036 377 aaKnown RBP12.14□□□□□ -0.47
CCDC40-205ENST00000571028 RPP38P78345 283 aaKnown RBP12.14□□□□□ -0.47
CCDC40-205ENST00000571028 PMPCAQ10713 525 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 EFR3AQ14156 821 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 GPAT3Q53EU6 434 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 RNFT1Q5M7Z0 435 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 DCST2Q5T1A1 773 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 ATAD3BQ5T9A4 648 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 REP15Q6BDI9 236 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 CLEC9AQ6UXN8 241 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 ZAR1Q86SH2 424 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 MSRB3Q8IXL7 192 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 ZZZ3Q8IYH5 903 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 DND1Q8IYX4 353 aaKnown RBP12.14□□□□□ -0.47
CCDC40-205ENST00000571028 OR2M7Q8NG81 312 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 OR10Q1Q8NGQ4 319 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 PAQR8Q8TEZ7 354 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 STACQ99469 402 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 GPATCH1Q9BRR8 931 aaKnown RBP12.14□□□□□ -0.47
CCDC40-205ENST00000571028 DOHHQ9BU89 302 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 CCDC106Q9BWC9 280 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 LIME1Q9H400 295 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 GALNT9Q9HCQ5 603 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 DUSP22Q9NRW4 184 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 MRGBPQ9NV56 204 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 EXD2Q9NVH0 621 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 SLC25A37Q9NYZ2 338 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 VAPAQ9P0L0 249 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 PCDHGB3Q9Y5G1 929 aa12.14□□□□□ -0.47
CCDC40-205ENST00000571028 PRRC2AP48634 2157 aaKnown RBP12.13□□□□□ -0.47
CCDC40-205ENST00000571028 PRAMEF25A6NGN4 478 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms