RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CHRNEQ04844 493 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 Q0VFX4 171 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 KPNB1Q14974 876 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 ADRM1Q16186 407 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 FAM98BQ52LJ0 330 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF311Q5JNZ3 666 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 EXOSC6Q5RKV6 272 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 PDZK1Q5T2W1 519 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 B3GNTL1Q67FW5 361 aaPredicted RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 TYW3Q6IPR3 259 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 PGM2L1Q6PCE3 622 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 BORAQ6PGQ7 559 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 ISLR2Q6UXK2 745 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 RTL4Q6ZR62 310 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 LINC00696Q6ZRV3 163 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 SPPL2CQ8IUH8 684 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 AQP12AQ8IXF9 295 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 CMIPQ8IY22 773 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 BEST3Q8N1M1 668 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR4N2Q8NGD1 307 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR52P1PQ8NH57 321 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 APOBEC4Q8WW27 367 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 HOXB13Q92826 284 aaPredicted RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 DTNBP1Q96EV8 351 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 C5orf34Q96MH7 638 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 LMF1Q96S06 567 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 SDF2Q99470 211 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 UTP23Q9BRU9 249 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 OSBPL11Q9BXB4 747 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 UGT2B28Q9BY64 529 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 QRSL1Q9H0R6 528 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC38A1Q9H2H9 487 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 YY1AP1Q9H869 796 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 MTHFD2LQ9H903 347 aaPredicted RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZBTB20Q9HC78 741 aaPredicted RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 BCL2L10Q9HD36 194 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 UBQLN4Q9NRR5 601 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 ABCG2Q9UNQ0 655 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 AURKCQ9UQB9 309 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF443Q9Y2A4 671 aaPredicted RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC9A8Q9Y2E8 581 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 CEP250Q9BV73 2442 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 DMXL1Q9Y485 3027 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 DHRS12A0PJE2 317 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 AGAP5A6NIR3 686 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 ADARB2-AS1A8MUL3 147 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 FAM47E-STBD1D6RA91 191 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 MKRN2OSH3BPM6 223 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 K7ENP7 123 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 M0QX08 132 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 GTPBP1O00178 669 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 FCMRO60667 390 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 UGT2B11O75310 529 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 CYP7B1O75881 506 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 DNAJB5O75953 348 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 SORBS2O94875 1100 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR6B1O95007 311 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 NADKO95544 446 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 OXSR1O95747 527 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 CSTAP01040 98 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 IGKV1D-16P01601 117 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 P04436 131 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 IFNW1P05000 195 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 GUSBP08236 651 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 UBL4AP11441 157 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 BMP4P12644 408 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 CYP4B1P13584 511 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 NID1P14543 1247 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 LORP23490 312 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 PRKAR1BP31321 381 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 IFNA8P32881 189 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 EVI2BP34910 448 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 ERFP50548 548 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 ATP12AP54707 1039 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 PCBP3P57721 371 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 RGS8P57771 180 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 FBXW4P57775 412 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 CHRNB3Q05901 458 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 MFAP5Q13361 173 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 FXNQ16595 210 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZSWIM7Q19AV6 140 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 GRAMD1BQ3KR37 738 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 IFI44LQ53G44 452 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 CYBRD1Q53TN4 286 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 INO80CQ6PI98 192 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 IL20RBQ6UXL0 311 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 C16orf47Q6ZP98 133 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 CCDC80Q76M96 950 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 EIF3MQ7L2H7 374 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 OLIG3Q7RTU3 272 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 NUP54Q7Z3B4 507 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 HMGN2P46Q86SG4 172 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 RANBP3LQ86VV4 465 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 CYP4Z1Q86W10 505 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 MISPQ8IVT2 679 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 APLFQ8IW19 511 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 GATSQ8NAP1 163 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 SMYD1Q8NB12 490 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 GOLM1Q8NBJ4 401 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 PHOSPHO1Q8TCT1 267 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms