RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TRIM25Q14258 630 aaKnown RBP21.5■■□□□ 1.03
RAB40C-212ENST00000569575 LIN52Q52LA3 116 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 PGM2L1Q6PCE3 622 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 C19orf48Q6RUI8 117 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 POGLUT1Q8NBL1 392 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 TMEM41AQ96HV5 264 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 NODALQ96S42 347 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 FAM173AQ9BQD7 235 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 KLRF1Q9NZS2 232 aa21.5■■□□□ 1.03
RAB40C-212ENST00000569575 CXCR6O00574 342 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 NDUFB5O43674 189 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 C8BP07358 591 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 NID1P14543 1247 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 GGT1P19440 569 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 ELAVL4P26378 380 aaKnown RBP21.49■■□□□ 1.03
RAB40C-212ENST00000569575 PRKAR1BP31321 381 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 KDELR2P33947 212 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 CEACAM7Q14002 265 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 ZNF169Q14929 603 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-212ENST00000569575 EIPR1Q53HC9 387 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 ZNF766Q5HY98 468 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 MTX3Q5HYI7 312 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 RNF220Q5VTB9 566 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 EIF3MQ7L2H7 374 aaKnown RBP21.49■■□□□ 1.03
RAB40C-212ENST00000569575 EID3Q8N140 333 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 TOR1AIP2Q8NFQ8 470 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 OR5M3Q8NGP4 307 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 OR52P1PQ8NH57 321 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 GRHL3Q8TE85 626 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 ASB9Q96DX5 294 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 SIGLEC12Q96PQ1 595 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 OSBPL11Q9BXB4 747 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 SLC25A18Q9H1K4 315 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 PIF1Q9H611 641 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 ANKRD10Q9NXR5 420 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 ACTR3BQ9P1U1 418 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 B3GNT3Q9Y2A9 372 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 TP53TG5Q9Y2B4 290 aa21.49■■□□□ 1.03
RAB40C-212ENST00000569575 SERINC4A6NH21 518 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 M0QX08 132 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 EIF4E2O60573 245 aaKnown RBP21.48■■□□□ 1.03
RAB40C-212ENST00000569575 FAM87AP0C7U9 286 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 PABPC4LP0CB38 370 aaKnown RBP21.48■■□□□ 1.03
RAB40C-212ENST00000569575 CCL3P10147 92 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 KCNJ10P78508 379 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 FGFBP1Q14512 234 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 DHRS4L2Q6PKH6 230 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 MDGA2Q7Z553 956 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 ZAR1Q86SH2 424 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 GRAMD2AQ8IUY3 354 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 ZNF440Q8IYI8 595 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 SLC26A7Q8TE54 656 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 WDR60Q8WVS4 1066 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 LZICQ8WZA0 190 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 CRELD1Q96HD1 420 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 CADM1Q9BY67 442 aaKnown RBP21.48■■□□□ 1.03
RAB40C-212ENST00000569575 SEC14L3Q9UDX4 400 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 WIF1Q9Y5W5 379 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 SNX13Q9Y5W8 968 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 PKD1L2Q7Z442 2459 aa21.48■■□□□ 1.03
RAB40C-212ENST00000569575 IGLV3-32A0A0A0MS00 114 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 MFN2O95140 757 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 ZIC2O95409 532 aaPredicted RBP21.47■■□□□ 1.03
RAB40C-212ENST00000569575 HOXB6P17509 224 aaKnown RBP21.47■■□□□ 1.03
RAB40C-212ENST00000569575 ZNF311Q5JNZ3 666 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 GLYATQ6IB77 296 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 ARMC8Q8IUR7 673 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 PNPLA2Q96AD5 504 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 DOHHQ9BU89 302 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 PINK1Q9BXM7 581 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 EXOSC3Q9NQT5 275 aaKnown RBP21.47■■□□□ 1.03
RAB40C-212ENST00000569575 ADPRHL2Q9NX46 363 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 KLHL28Q9NXS3 571 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 RPS6KA6Q9UK32 745 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 BAG5Q9UL15 447 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 BOKQ9UMX3 212 aaPredicted RBP21.47■■□□□ 1.03
RAB40C-212ENST00000569575 CELSR3Q9NYQ7 3312 aa21.47■■□□□ 1.03
RAB40C-212ENST00000569575 TNRC6AQ8NDV7 1962 aaKnown RBP21.47■■□□□ 1.03
RAB40C-212ENST00000569575 SYT5O00445 386 aa21.46■■□□□ 1.03
RAB40C-212ENST00000569575 ANGPTL1O95841 491 aa21.46■■□□□ 1.03
RAB40C-212ENST00000569575 GAS1P54826 345 aa21.46■■□□□ 1.03
RAB40C-212ENST00000569575 SUMO3P55854 103 aaPredicted RBP21.46■■□□□ 1.03
RAB40C-212ENST00000569575 KCNJ2P63252 427 aa21.46■■□□□ 1.03
RAB40C-212ENST00000569575 HYAL4Q2M3T9 481 aa21.46■■□□□ 1.03
RAB40C-212ENST00000569575 PDZK1Q5T2W1 519 aa21.46■■□□□ 1.03
RAB40C-212ENST00000569575 RNF148Q8N7C7 305 aa21.46■■□□□ 1.03
RAB40C-212ENST00000569575 RBMXL3Q8N7X1 1067 aaKnown RBP21.46■■□□□ 1.03
RAB40C-212ENST00000569575 TRIM15Q9C019 465 aa21.46■■□□□ 1.03
RAB40C-212ENST00000569575 KCNE5Q9UJ90 142 aa21.46■■□□□ 1.03
RAB40C-212ENST00000569575 PEX1O43933 1283 aa21.45■■□□□ 1.02
RAB40C-212ENST00000569575 TRIM3O75382 744 aaPredicted RBP21.45■■□□□ 1.02
RAB40C-212ENST00000569575 PDGFAP04085 211 aa21.45■■□□□ 1.02
RAB40C-212ENST00000569575 PTGDSP41222 190 aa21.45■■□□□ 1.02
RAB40C-212ENST00000569575 RPS26P11Q5JNZ5 115 aaPredicted RBP21.45■■□□□ 1.02
RAB40C-212ENST00000569575 FNDC7Q5VTL7 733 aa21.45■■□□□ 1.02
RAB40C-212ENST00000569575 GALNT10Q86SR1 603 aa21.45■■□□□ 1.02
RAB40C-212ENST00000569575 ULK2Q8IYT8 1036 aa21.45■■□□□ 1.02
RAB40C-212ENST00000569575 CATSPER1Q8NEC5 780 aa21.45■■□□□ 1.02
RAB40C-212ENST00000569575 FIG4Q92562 907 aa21.45■■□□□ 1.02
RAB40C-212ENST00000569575 ZG16BQ96DA0 208 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms