RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 FAM110BQ8TC76 370 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 ACTRT2Q8TDY3 377 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 RNF128Q8TEB7 428 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 EXT2Q93063 718 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 C3orf49Q96BT1 292 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 UBXN10Q96LJ8 280 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 ALG9Q9H6U8 611 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 C3orf14Q9HBI5 128 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 Q9N2J8 555 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 SENP1Q9P0U3 644 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 UTS2RQ9UKP6 389 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 PSAT1Q9Y617 370 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 HEATR5AQ86XA9 2040 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 OR5H1A6NKK0 313 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 TTC36A6NLP5 189 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 B4DXG7 233 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 PLOD3O60568 738 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 BANF1O75531 89 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 SLITRK5O94991 958 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 VENTXO95231 258 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 WISP3O95389 354 aaPredicted RBP7.66□□□□□ -1.18
SMG1-216ENST00000569122 PGM3O95394 542 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 LTA4HP09960 611 aaKnown RBP7.66□□□□□ -1.18
SMG1-216ENST00000569122 CD40P25942 277 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 CXCR5P32302 372 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 ARL1P40616 181 aaPredicted RBP7.66□□□□□ -1.18
SMG1-216ENST00000569122 ZNF41P51814 821 aaPredicted RBP7.66□□□□□ -1.18
SMG1-216ENST00000569122 CHN2P52757 468 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 ARL4CP56559 192 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 RAB10P61026 200 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 MRPS35P82673 323 aaKnown RBP7.66□□□□□ -1.18
SMG1-216ENST00000569122 PRR5P85299 388 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 KCTD19Q17RG1 926 aaPredicted RBP7.66□□□□□ -1.18
SMG1-216ENST00000569122 ZNF628Q5EBL2 1059 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 FRG2Q64ET8 278 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 SHISA2Q6UWI4 295 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 USP43Q70EL4 1123 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 NUFIP2Q7Z417 695 aaKnown RBP7.66□□□□□ -1.18
SMG1-216ENST00000569122 CCDC91Q7Z6B0 441 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 ATG4DQ86TL0 474 aaPredicted RBP7.66□□□□□ -1.18
SMG1-216ENST00000569122 ISCA2Q86U28 154 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 CCDC116Q8IYX3 515 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 METTL4Q8N3J2 472 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 HTRA1Q92743 480 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 ATP6V1E2Q96A05 226 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 MTBPQ96DY7 904 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 PBKQ96KB5 322 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 KLHL15Q96M94 604 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 ZNF681Q96N22 645 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 FOXN4Q96NZ1 517 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 FRG2BQ96QU4 278 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 IPPKQ9H8X2 491 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 KLHL9Q9P2J3 617 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 CHMP2BQ9UQN3 213 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 VDAC3Q9Y277 283 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 PCDHB14Q9Y5E9 798 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 TEX264Q9Y6I9 313 aa7.66□□□□□ -1.18
SMG1-216ENST00000569122 IGHV4-61A0A0C4DH41 118 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 A0A0J9YW62 118 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 UBXN8O00124 270 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 LYZL6O75951 148 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 KCNH1O95259 989 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 ESRRBO95718 433 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 ANGPTL1O95841 491 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 ERCC1P07992 297 aaPredicted RBP7.65□□□□□ -1.18
SMG1-216ENST00000569122 GFAPP14136 432 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 CRABP2P29373 138 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 OR3A2P47893 321 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 ALDH9A1P49189 494 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 ALDH18A1P54886 795 aaKnown RBP7.65□□□□□ -1.18
SMG1-216ENST00000569122 SNRPD2P62316 118 aaKnown RBP7.65□□□□□ -1.18
SMG1-216ENST00000569122 CSTF3Q12996 717 aaKnown RBP7.65□□□□□ -1.18
SMG1-216ENST00000569122 GTF2H2Q13888 395 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 LTB4RQ15722 352 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 CARTPTQ16568 116 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 ZNF239Q16600 458 aaKnown RBP7.65□□□□□ -1.18
SMG1-216ENST00000569122 SH2D4BQ5SQS7 431 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 OR7E24Q6IFN5 339 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 GTF2H2CQ6P1K8 395 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 NPSR1Q6W5P4 371 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 RAPH1Q70E73 1250 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 FCRLAQ7L513 359 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 COMMD6Q7Z4G1 85 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 MARCH3Q86UD3 253 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 MISPQ8IVT2 679 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 LILRA2Q8N149 483 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 CEP112Q8N8E3 955 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 SEMA6DQ8NFY4 1073 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 RHEBL1Q8TAI7 183 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.65□□□□□ -1.18
SMG1-216ENST00000569122 ABHD3Q8WU67 409 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 ARL8AQ96BM9 186 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 TM4SF18Q96CE8 201 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 CNRIP1Q96F85 164 aaPredicted RBP7.65□□□□□ -1.18
SMG1-216ENST00000569122 GPR22Q99680 433 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 CPNE1Q99829 537 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 MRPL1Q9BYD6 325 aaKnown RBP7.65□□□□□ -1.18
SMG1-216ENST00000569122 ELOVL6Q9H5J4 265 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 CAB39LQ9H9S4 337 aa7.65□□□□□ -1.18
SMG1-216ENST00000569122 PLAC1Q9HBJ0 212 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms