RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 HNRNPDQ14103 355 aaKnown RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 RFTN1Q14699 578 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 CA9Q16790 459 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 UGT3A2Q3SY77 523 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 NADK2Q4G0N4 442 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 SPDYCQ5MJ68 293 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 FFAR4Q5NUL3 377 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 DCAF10Q5QP82 559 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 HES3Q5TGS1 186 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 SH2D5Q6ZV89 423 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 IL17RELQ6ZVW7 336 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 ISCA2Q86U28 154 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 RTN4RL2Q86UN3 420 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 COMMD2Q86X83 199 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 GRAMD2AQ8IUY3 354 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 DNAJC22Q8N4W6 341 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 CPSF7Q8N684 471 aaKnown RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 C4orf32Q8N8J7 132 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZNF383Q8NA42 475 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMEM161BQ8NDZ6 487 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 OR56B2PQ8NGI1 322 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 OR13J1Q8NGT2 312 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 ERMNQ8TAM6 284 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 BRSK1Q8TDC3 778 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 GRHL3Q8TE85 626 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 GGHQ92820 318 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 MYLPFQ96A32 169 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 RFT1Q96AA3 541 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 THOC1Q96FV9 657 aaKnown RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 PRAC1Q96KF2 57 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 SPAG8Q99932 426 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 TRAF4Q9BUZ4 470 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 BBS2Q9BXC9 721 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 GON7Q9BXV9 100 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 POLR1EQ9GZS1 481 aaKnown RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 WWTR1Q9GZV5 400 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 ATG10Q9H0Y0 220 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 FAM124BQ9H5Z6 455 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMEM231Q9H6L2 316 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 RMND5AQ9H871 391 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 ACTR8Q9H981 624 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZNF71Q9NQZ8 489 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 GPR173Q9NS66 373 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 PANK4Q9NVE7 773 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMEM181Q9P2C4 612 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 DEC1Q9P2X7 70 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 IL20RAQ9UHF4 553 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 SLC7A7Q9UM01 511 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 ENTPD4Q9Y227 616 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 RUVBL2Q9Y230 463 aaKnown RBP2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMED5Q9Y3A6 229 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 PYGO1Q9Y3Y4 419 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 MFHAS1Q9Y4C4 1052 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 CFAP46Q8IYW2 2715 aa2.92□□□□□ -1.94
HMGB1P6-201ENST00000569046 PIEZO2Q9H5I5 2752 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 MGAQ8IWI9 3026 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 A0A0U1RQV5 110 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 FAM230AA0A1W2PPH8 454 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMEM89A2RUT3 159 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZNF840PA6NDX5 716 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 F8VP50 259 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 CCL24O00175 119 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 CASQ2O14958 399 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 COCHO43405 550 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 TLX2O43763 284 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 PFKFB2O60825 505 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 HUS1O60921 280 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 SDC3O75056 442 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 CLPTM1O96005 669 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 HMBSP08397 361 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 CISD3P0C7P0 127 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 GZMAP12544 262 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 B4GALT1P15291 398 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 EZRP15311 586 aaKnown RBP2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 ATP6V1C1P21283 382 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 DRD5P21918 477 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 PAICSP22234 425 aaKnown RBP2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 CCNCP24863 283 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 ITGA3P26006 1051 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 SSTR1P30872 391 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 CEACAM8P31997 349 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 VEGFCP49767 419 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 B3GALT5-AS1P59052 145 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 RPS18P62269 152 aaKnown RBP2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 NUCB2P80303 420 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 MYL7Q01449 175 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 SULT2A1Q06520 285 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 LGALS3BPQ08380 585 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 DMPKQ09013 629 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 COX10Q12887 443 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 SRSF6Q13247 344 aaKnown RBP2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 MSLNQ13421 630 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMEM187Q14656 261 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 P2RY6Q15077 328 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 KRT31Q15323 416 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZMYND11Q15326 602 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 IGFBP7Q16270 282 aa2.91□□□□□ -1.94
HMGB1P6-201ENST00000569046 PHLDA2Q53GA4 152 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms