RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ATG4DQ86TL0 474 aaPredicted RBP11.08□□□□□ -0.64
SNX29-207ENST00000568949 ZNF619Q8N2I2 560 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 ZBTB8AQ96BR9 441 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 PHF21BQ96EK2 531 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 NSUN5Q96P11 429 aaKnown RBP11.08□□□□□ -0.64
SNX29-207ENST00000568949 GP6Q9HCN6 339 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 VPS29Q9UBQ0 182 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 PYCARDQ9ULZ3 195 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 NFU1Q9UMS0 254 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 VDAC3Q9Y277 283 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 A0A0J9YW62 118 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 HMX2A2RU54 273 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 UBFD1O14562 309 aaKnown RBP11.07□□□□□ -0.64
SNX29-207ENST00000568949 TNFSF11O14788 317 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 LMX1BO60663 402 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 RAMP1O60894 148 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 UTS2O95399 124 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 OTCP00480 354 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 IGHV4-31P0DP07 118 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 HSD3B1P14060 373 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 PSMA4P25789 261 aaKnown RBP11.07□□□□□ -0.64
SNX29-207ENST00000568949 HSD3B2P26439 372 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 C21orf58P58505 322 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 IRX1P78414 480 aaPredicted RBP11.07□□□□□ -0.64
SNX29-207ENST00000568949 RUNX1T1Q06455 604 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 CSTF3Q12996 717 aaKnown RBP11.07□□□□□ -0.64
SNX29-207ENST00000568949 HEPACAMQ14CZ8 416 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 RNPS1Q15287 305 aaKnown RBP11.07□□□□□ -0.64
SNX29-207ENST00000568949 CPTPQ5TA50 214 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 MROH9Q5TGP6 573 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 APOOLQ6UXV4 268 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 CCDC25Q86WR0 208 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 TDRPQ86YL5 185 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 CREG2Q8IUH2 290 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 BANPQ8N9N5 519 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 ACTRT2Q8TDY3 377 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 RNF128Q8TEB7 428 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 FBF1Q8TES7 1133 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 PROX1Q92786 737 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 OSTF1Q92882 214 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 RADILQ96JH8 1075 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 KLHL13Q9P2N7 655 aa11.07□□□□□ -0.64
SNX29-207ENST00000568949 C19orf53Q9UNZ5 99 aaPredicted RBP11.07□□□□□ -0.64
SNX29-207ENST00000568949 GOLGA8QA0A0J9YX86 632 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 GOLGA8OA6NCC3 632 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 TTC36A6NLP5 189 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 ALG1L2C9J202 215 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 GOLGA8NF8WBI6 632 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 GOLGA8RI6L899 631 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 GMFGO60234 142 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 PCDH7O60245 1069 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 PSMG1O95456 288 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 ADAP00813 363 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 OPN1LWP04000 364 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 RBP1P09455 135 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 ME2P23368 584 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 CDH11P55287 796 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 CARD18P57730 90 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 ZNHIT3Q15649 155 aaPredicted RBP11.06□□□□□ -0.64
SNX29-207ENST00000568949 ZNF239Q16600 458 aaKnown RBP11.06□□□□□ -0.64
SNX29-207ENST00000568949 LIPNQ5VXI9 398 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 C11orf71Q6IPW1 123 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 LETMD1Q6P1Q0 360 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 BHLHA15Q7RTS1 189 aaPredicted RBP11.06□□□□□ -0.64
SNX29-207ENST00000568949 NUFIP2Q7Z417 695 aaKnown RBP11.06□□□□□ -0.64
SNX29-207ENST00000568949 TRABD2AQ86V40 505 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 ARIH2OSQ8N7S6 290 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 ABHD3Q8WU67 409 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 CPNE4Q96A23 557 aaPredicted RBP11.06□□□□□ -0.64
SNX29-207ENST00000568949 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
SNX29-207ENST00000568949 KLHL15Q96M94 604 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 RNF145Q96MT1 663 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 BBS4Q96RK4 519 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 LMF2Q9BU23 707 aaKnown RBP11.06□□□□□ -0.64
SNX29-207ENST00000568949 CACNG6Q9BXT2 260 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 L2HGDHQ9H9P8 463 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 C3orf14Q9HBI5 128 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 CBLN4Q9NTU7 201 aa11.06□□□□□ -0.64
SNX29-207ENST00000568949 GNG14A0A1W2PPG7 69 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 A0A1W2PRB8 838 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 MYO1GB0I1T2 1018 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 UPK1AO00322 258 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 SMIM24O75264 130 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 PGRP06401 933 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 NGFRP08138 427 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 RPS17P08708 135 aaKnown RBP11.05□□□□□ -0.64
SNX29-207ENST00000568949 CSF3P09919 207 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 ZNF16P17020 682 aaPredicted RBP11.05□□□□□ -0.64
SNX29-207ENST00000568949 USF1P22415 310 aaPredicted RBP11.05□□□□□ -0.64
SNX29-207ENST00000568949 IGFBP5P24593 272 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 TYK2P29597 1187 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 TTKP33981 857 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 GSTM5P46439 218 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 RFX3P48380 749 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 GZMKP49863 264 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 SERPINB8P50452 374 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 RAE1P78406 368 aaKnown RBP11.05□□□□□ -0.64
SNX29-207ENST00000568949 SRSF2Q01130 221 aaKnown RBP11.05□□□□□ -0.64
SNX29-207ENST00000568949 CKAP4Q07065 602 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms