RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 MBD3L2Q8NHZ7 208 aaPredicted RBP9.4□□□□□ -0.9
UBR1-207ENST00000568782 CDS1Q92903 461 aa9.4□□□□□ -0.9
UBR1-207ENST00000568782 C1GALT1C1Q96EU7 318 aa9.4□□□□□ -0.9
UBR1-207ENST00000568782 C16orf58Q96GQ5 468 aa9.4□□□□□ -0.9
UBR1-207ENST00000568782 TUBA1CQ9BQE3 449 aa9.4□□□□□ -0.9
UBR1-207ENST00000568782 SFXN3Q9BWM7 321 aa9.4□□□□□ -0.9
UBR1-207ENST00000568782 TRIM8Q9BZR9 551 aa9.4□□□□□ -0.9
UBR1-207ENST00000568782 MANSC1Q9H8J5 431 aa9.4□□□□□ -0.9
UBR1-207ENST00000568782 MCCC2Q9HCC0 563 aa9.4□□□□□ -0.9
UBR1-207ENST00000568782 PAQR5Q9NXK6 330 aaPredicted RBP9.4□□□□□ -0.9
UBR1-207ENST00000568782 AP4B1Q9Y6B7 739 aa9.4□□□□□ -0.9
UBR1-207ENST00000568782 MED12Q93074 2177 aa9.4□□□□□ -0.91
UBR1-207ENST00000568782 CENPEQ02224 2701 aa9.4□□□□□ -0.91
UBR1-207ENST00000568782 MPDZO75970 2070 aa9.4□□□□□ -0.91
UBR1-207ENST00000568782 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 PRSS51A0A1B0GVH4 220 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 SLC22A20A6NK97 555 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 RNASET2O00584 256 aaKnown RBP9.39□□□□□ -0.91
UBR1-207ENST00000568782 HDAC3O15379 428 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 SEC14L5O43304 696 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 ZIC3O60481 467 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 RCBTB2O95199 551 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 CPSF4O95639 269 aaKnown RBP9.39□□□□□ -0.91
UBR1-207ENST00000568782 KITP10721 976 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 FCGR2AP12318 317 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 ZNF708P17019 499 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 MATN1P21941 496 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 ARRB2P32121 409 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 S100A3P33764 101 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 CHI3L1P36222 383 aaPredicted RBP9.39□□□□□ -0.91
UBR1-207ENST00000568782 LHX2P50458 406 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 C21orf58P58505 322 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 TFF3Q07654 80 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 FGFBP1Q14512 234 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 FLYWCH1Q4VC44 716 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 DCST1Q5T197 706 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 DCST2Q5T1A1 773 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 OR4F3Q6IEY1 312 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 PPP4R4Q6NUP7 873 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 C16orf62Q7Z3J2 963 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 SPATA19Q7Z5L4 167 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 CAMKMTQ7Z624 323 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 GALNT10Q86SR1 603 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 LIX1LQ8IVB5 337 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 WDR75Q8IWA0 830 aaKnown RBP9.39□□□□□ -0.91
UBR1-207ENST00000568782 RIMKLAQ8IXN7 391 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 OR8J2Q8NGG1 315 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 OR4C3Q8NH37 302 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 B4GALNT2Q8NHY0 566 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 PSMA8Q8TAA3 256 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 PHOSPHO1Q8TCT1 267 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 RNF138Q8WVD3 245 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 DYDC1Q8WWB3 177 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 SMPDL3BQ92485 455 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 HOXB13Q92826 284 aaPredicted RBP9.39□□□□□ -0.91
UBR1-207ENST00000568782 RNASE6Q93091 150 aaKnown RBP9.39□□□□□ -0.91
UBR1-207ENST00000568782 ZBTB8AQ96BR9 441 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 INTS12Q96CB8 462 aaKnown RBP9.39□□□□□ -0.91
UBR1-207ENST00000568782 GIMAP5Q96F15 307 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 REXO5Q96IC2 774 aaKnown RBP9.39□□□□□ -0.91
UBR1-207ENST00000568782 SLC35G5Q96KT7 338 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 LURAP1Q96LR2 239 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 UCN2Q96RP3 112 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 SORT1Q99523 831 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 PIGMQ9H3S5 423 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 CXorf36Q9H7Y0 433 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 MEAF6Q9HAF1 191 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 HAO1Q9UJM8 370 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 VDAC3Q9Y277 283 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 CREBBPQ92793 2442 aa9.39□□□□□ -0.91
UBR1-207ENST00000568782 RNF103-CHMP3A0A140T963 221 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 A0A1W2PQD3 144 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 OR2M5A3KFT3 312 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 TUBAL3A6NHL2 446 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 GJE1A6NN92 205 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 CASKO14936 926 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 HCRTR2O43614 444 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 TNFRSF21O75509 655 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 STX11O75558 287 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 SYNGR4O95473 234 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 PLGP00747 810 aaPredicted RBP9.38□□□□□ -0.91
UBR1-207ENST00000568782 IGKV1D-16P01601 117 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 CRHP06850 196 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 ZNF17P17021 662 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 UQCRC2P22695 453 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 MAP3K8P41279 467 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 EIF1P41567 113 aaKnown RBP9.38□□□□□ -0.91
UBR1-207ENST00000568782 ZNF136P52737 540 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 WNT3P56703 355 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 HBA1P69905 142 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 HPCAP84074 193 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 BEND6Q5SZJ8 279 aaPredicted RBP9.38□□□□□ -0.91
UBR1-207ENST00000568782 CCNJQ5T5M9 372 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 GTF2IRD2BQ6EKJ0 949 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 SEM1Q6ZVN7 128 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 C6orf120Q7Z4R8 191 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 GTF2IRD2Q86UP8 949 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 GATSQ8NAP1 163 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 OR5AK3PQ8NH89 298 aa9.38□□□□□ -0.91
UBR1-207ENST00000568782 FAM110BQ8TC76 370 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms