RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TMEM255BQ8WV15 326 aa6.54□□□□□ -1.36
SMG1-215ENST00000568239 DAZLQ92904 295 aaKnown RBP6.54□□□□□ -1.36
SMG1-215ENST00000568239 FAM46AQ96IP4 442 aaKnown RBP6.54□□□□□ -1.36
SMG1-215ENST00000568239 DHRS1Q96LJ7 313 aa6.54□□□□□ -1.36
SMG1-215ENST00000568239 RHNO1Q9BSD3 238 aa6.54□□□□□ -1.36
SMG1-215ENST00000568239 G6PC3Q9BUM1 346 aa6.54□□□□□ -1.36
SMG1-215ENST00000568239 SAP130Q9H0E3 1048 aa6.54□□□□□ -1.36
SMG1-215ENST00000568239 VCX3AQ9NNX9 186 aa6.54□□□□□ -1.36
SMG1-215ENST00000568239 SLC22A11Q9NSA0 550 aa6.54□□□□□ -1.36
SMG1-215ENST00000568239 COPS7AQ9UBW8 275 aa6.54□□□□□ -1.36
SMG1-215ENST00000568239 RNF6Q9Y252 685 aa6.54□□□□□ -1.36
SMG1-215ENST00000568239 ADAMTS20P59510 1910 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 C2orf92A0A1B0GVN3 265 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 SMIM31A0A1B0GVY4 71 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 TCRBV16S1A1N1A0A5B0 115 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 ARRDC5A6NEK1 342 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 H3BSA7 217 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 SOX30O94993 753 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 IFI6P09912 130 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 GPR4P46093 362 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 GCGRP47871 477 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 NUDT6P53370 316 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 NUP107P57740 925 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 TOP3AQ13472 1001 aaPredicted RBP6.53□□□□□ -1.36
SMG1-215ENST00000568239 OR1Q1Q15612 314 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 DECR1Q16698 335 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 CCDC81Q6ZN84 652 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 PRICKLE2Q7Z3G6 844 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 GPR141Q7Z602 305 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 APLFQ8IW19 511 aaPredicted RBP6.53□□□□□ -1.36
SMG1-215ENST00000568239 NRMQ8IXM6 262 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 DEPDC4Q8N2C3 294 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 CADM2Q8N3J6 435 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 IQCF1Q8N6M8 205 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 OR7G1Q8NGA0 311 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 OR4C3Q8NH37 302 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 CNOT9Q92600 299 aaKnown RBP6.53□□□□□ -1.36
SMG1-215ENST00000568239 DIO2Q92813 273 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 NMD3Q96D46 503 aaKnown RBP6.53□□□□□ -1.36
SMG1-215ENST00000568239 IL4I1Q96RQ9 567 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 MESP1Q9BRJ9 268 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 NXF5Q9H1B4 397 aaKnown RBP6.53□□□□□ -1.36
SMG1-215ENST00000568239 LIN28AQ9H9Z2 209 aaKnown RBP6.53□□□□□ -1.36
SMG1-215ENST00000568239 TUBA8Q9NY65 449 aaPredicted RBP6.53□□□□□ -1.36
SMG1-215ENST00000568239 TPRKBQ9Y3C4 175 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 HSPE1-MOB4S4R3N1 261 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 IGKV3D-11A0A0A0MRZ8 115 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 IDSB3KWA1 339 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 GMFGO60234 142 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 REM1O75628 298 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 CCL4P13236 92 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 RPS4Y1P22090 263 aaKnown RBP6.53□□□□□ -1.36
SMG1-215ENST00000568239 HTR2AP28223 471 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 IFNGR2P38484 337 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 CCR4P51679 360 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 NR0B1P51843 470 aaKnown RBP6.53□□□□□ -1.36
SMG1-215ENST00000568239 ZNF136P52737 540 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 NDUFAF6Q330K2 333 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 LAIR1Q6GTX8 287 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 ZNF773Q6PK81 442 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 CASP12Q6UXS9 341 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 PTCHD4Q6ZW05 846 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 AHSA2Q719I0 299 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 COX15Q7KZN9 410 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 SLITRK4Q8IW52 837 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 PARP8Q8N3A8 854 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 MORN4Q8NDC4 146 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 AGBL5Q8NDL9 886 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 THAP3Q8WTV1 239 aaPredicted RBP6.53□□□□□ -1.36
SMG1-215ENST00000568239 METTL21AQ8WXB1 218 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 NODALQ96S42 347 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 ADOQ96SZ5 270 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 PITX2Q99697 317 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 GPA33Q99795 319 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 NUDT9Q9BW91 350 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 DGCR6LQ9BY27 220 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 CXorf56Q9H5V9 222 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 TMEM27Q9HBJ8 222 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 POLE3Q9NRF9 147 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 CFL2Q9Y281 166 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 AHCTF1Q8WYP5 2266 aa6.53□□□□□ -1.36
SMG1-215ENST00000568239 GNB5O14775 395 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 MAN1A2O60476 641 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 WBP4O75554 376 aaKnown RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 DDAH2O95865 285 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 CSTAP01040 98 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 CLPSP04118 112 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 THY1P04216 161 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 CCDC159P0C7I6 412 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 GALNSP34059 522 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 KRT20P35900 424 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 ATP12AP54707 1039 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 PMS2P3Q13401 168 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 SF3A2Q15428 464 aaKnown RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 CLEC12AQ5QGZ9 265 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 FAM69BQ5VUD6 431 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 FAM199XQ6PEV8 388 aaPredicted RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 SLC29A4Q7RTT9 530 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 CCDC103Q8IW40 242 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 PIGXQ8TBF5 258 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms