RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 GGT2P36268 569 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 ALDH3B2P48448 385 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 CLK3P49761 638 aaKnown RBP13.54□□□□□ -0.24
COMMD4-221ENST00000567935 EMDP50402 254 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 RGS8P57771 180 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-221ENST00000567935 TAS2R41P59536 307 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 EEF1A1P68104 462 aaKnown RBP13.54□□□□□ -0.24
COMMD4-221ENST00000567935 RPP38P78345 283 aaKnown RBP13.54□□□□□ -0.24
COMMD4-221ENST00000567935 CCL7P80098 99 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 IL5RAQ01344 420 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 ST3GAL3Q11203 375 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 TRA2AQ13595 282 aaKnown RBP eCLIP13.54□□□□□ -0.24
COMMD4-221ENST00000567935 RAPSNQ13702 412 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 ZNF267Q14586 743 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-221ENST00000567935 TRAM2Q15035 370 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 SYT16Q17RD7 645 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 PROX2Q3B8N5 592 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 PERM1Q5SV97 790 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 RHBDD2Q6NTF9 364 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 ZNF773Q6PK81 442 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 CD300LDQ6UXZ3 194 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 RANBP3LQ86VV4 465 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-221ENST00000567935 VRK2Q86Y07 508 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 EID2Q8N6I1 236 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 SLC38A4Q969I6 547 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 VSTM2LQ96N03 204 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 PTCHD1Q96NR3 888 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 C14orf105Q9NVL8 296 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 MKLN1Q9UL63 735 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 TPRKBQ9Y3C4 175 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 TMEM184BQ9Y519 407 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-221ENST00000567935 PCDHGA10Q9Y5H3 936 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 NUP210LQ5VU65 1888 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 NOTCH2Q04721 2471 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 BOD1L1Q8NFC6 3051 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 IGKV3D-11A0A0A0MRZ8 115 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 TRBV4-1A0A0J9YWV2 114 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 A0A1W2PQM1 296 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 A8MU76 341 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 KLK10O43240 276 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 MPZL2O60487 215 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 SEMA7AO75326 666 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 LDOC1O95751 146 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-221ENST00000567935 IFNA16P05015 189 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 LINGO3P0C6S8 592 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 CDK4P11802 303 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 TNNI3P19429 210 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 GSTM3P21266 225 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 CRHBPP24387 322 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 POLR2IP36954 125 aaKnown RBP13.53□□□□□ -0.24
COMMD4-221ENST00000567935 PSPHP78330 225 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 BTG2P78543 158 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 DAB2P98082 770 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 CDK5R2Q13319 367 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 ELAVL1Q15717 326 aaKnown RBP13.53□□□□□ -0.24
COMMD4-221ENST00000567935 C4orf17Q53FE4 359 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 DGAT2L6Q6ZPD8 337 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 RBM45Q8IUH3 476 aaKnown RBP13.53□□□□□ -0.24
COMMD4-221ENST00000567935 LACC1Q8IV20 430 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 EXD3Q8N9H8 876 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 OR9Q2Q8NGE9 314 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 CNPPD1Q9BV87 410 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 UCK2Q9BZX2 261 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 TGIF2Q9GZN2 237 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 CCNB1IP1Q9NPC3 277 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 SCN3BQ9NY72 215 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 SEC16AO15027 2179 aa13.53□□□□□ -0.24
COMMD4-221ENST00000567935 SLC1A7O00341 560 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 OR10H3O60404 316 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 NME6O75414 186 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 CDC123O75794 336 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 CYP7B1O75881 506 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 KCNK2O95069 426 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 ANGPTL1O95841 491 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 CYC1P08574 325 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 CYP4B1P13584 511 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 OSMP13725 252 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 MAOAP21397 527 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 ELK4P28324 431 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 LCN1P31025 176 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 RORAP35398 523 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 OR1D4P47884 311 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 SH3BGRP55822 239 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 PSG6Q00889 435 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 ALDH6A1Q02252 535 aaKnown RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 PIN1Q13526 163 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 MAD2L1BPQ15013 274 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 GPR68Q15743 365 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF836Q6ZNA1 936 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 WDR53Q7Z5U6 358 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 COMTD1Q86VU5 262 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 GRAMD2AQ8IUY3 354 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 CMIPQ8IY22 773 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 METTL27Q8N6F8 245 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 SIMC1Q8NDZ2 872 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 PLPP5Q8NEB5 264 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 OR14A16Q8NHC5 309 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 IFI44Q8TCB0 444 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 SLC7A13Q8TCU3 470 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 KCNE4Q8WWG9 221 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms