RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	PIGQ	Q9BRB3	760 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	YIPF4	Q9BSR8	244 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	G6PC3	Q9BUM1	346 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	C1orf50	Q9BV19	199 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	BTBD2	Q9BX70	525 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZNF395	Q9H8N7	513 aa	Predicted RBP	6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	MED4	Q9NPJ6	270 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	GIN1	Q9NXP7	522 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	STOML1	Q9UBI4	398 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	ITGB1BP2	Q9UKP3	347 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	RAP2C	Q9Y3L5	183 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZNF337	Q9Y3M9	751 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	L3MBTL1	Q9Y468	752 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	SNX8	Q9Y5X2	465 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	ACTL7B	Q9Y614	415 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	DSCAM	O60469	2012 aa		6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	MAP1A	P78559	2803 aa	Predicted RBP	6.26	□□□□□ -1.41
SF3B3-209	ENST00000567635	IGLV3-32	A0A0A0MS00	114 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	OR2M5	A3KFT3	312 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	ALG1L2	C9J202	215 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	CFLAR	O15519	480 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	NDUFB5	O43674	189 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	TNFRSF21	O75509	655 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	OXSR1	O95747	527 aa	Predicted RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	HMGN2	P05204	90 aa	Known RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	DHRS4L1	P0CG22	281 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	G6PD	P11413	515 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	HPGD	P15428	266 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	POU3F2	P20265	443 aa	Predicted RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	SLC1A6	P48664	564 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	RPL14	P50914	215 aa	Known RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	CLDN8	P56748	225 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	C21orf58	P58505	322 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	POU6F2	P78424	691 aa	Predicted RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	FOXF2	Q12947	444 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	STX3	Q13277	289 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	SNTB1	Q13884	538 aa	Known RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	MPP2	Q14168	576 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	PTGR1	Q14914	329 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	PGS1	Q32NB8	556 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	SPDYE7P	Q495Y7	208 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	HSP90B2P	Q58FF3	399 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	TNFAIP8L3	Q5GJ75	292 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	EXOSC6	Q5RKV6	272 aa	Known RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	HHAT	Q5VTY9	493 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	RAET1L	Q5VY80	246 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	FIGNL1	Q6PIW4	674 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	PLXDC2	Q6UX71	529 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	GALNT10	Q86SR1	603 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	GRAMD2A	Q8IUY3	354 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	RIMKLA	Q8IXN7	391 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZZZ3	Q8IYH5	903 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	UBQLNL	Q8IYU4	475 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	KIRREL3	Q8IZU9	778 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	MEIOB	Q8N635	442 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	KRTCAP2	Q8N6L1	136 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	COX18	Q8N8Q8	333 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	OR56A1	Q8NGH5	318 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	PSMA8	Q8TAA3	256 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	FBXO30	Q8TB52	745 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	FAM222B	Q8WU58	562 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	NUDT8	Q8WV74	236 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	JADE3	Q92613	823 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	FAM120B	Q96EK7	910 aa	Known RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	CHMP6	Q96FZ7	201 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	PPP1R36	Q96LQ0	422 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	STAC	Q99469	402 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	PAIP2	Q9BPZ3	127 aa	Known RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	DUSP26	Q9BV47	211 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	SFXN3	Q9BWM7	321 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	ACTRT3	Q9BYD9	372 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	BHLHE41	Q9C0J9	482 aa	Predicted RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	C20orf27	Q9GZN8	174 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	PIGM	Q9H3S5	423 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	PIGU	Q9H490	435 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	AKTIP	Q9H8T0	292 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	UBQLN4	Q9NRR5	601 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	DUSP22	Q9NRW4	184 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	SIRT3	Q9NTG7	399 aa	Predicted RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZCCHC3	Q9NUD5	404 aa	Known RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	FBXO34	Q9NWN3	711 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	ASIC5	Q9NY37	505 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	NOP53	Q9NZM5	478 aa	Known RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	CRIM1	Q9NZV1	1036 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	JKAMP	Q9P055	326 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	CLCF1	Q9UBD9	225 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	FAF1	Q9UNN5	650 aa	Predicted RBP	6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	AP4B1	Q9Y6B7	739 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	ITPR3	Q14573	2671 aa		6.25	□□□□□ -1.41
SF3B3-209	ENST00000567635	HIVEP1	P15822	2718 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635		A0A087WZY1	265 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	TUBAL3	A6NHL2	446 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	SLC22A20	A6NK97	555 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	EEF1E1-BLOC1S5	C9J1V9	151 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	SCD	O00767	359 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	EEF1E1	O43324	174 aa	Known RBP	6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	HCRTR2	O43614	444 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	GMFG	O60234	142 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms