RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 KIAA0513O60268 411 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 PDE9AO76083 593 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 KRT75O95678 551 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 ANGPTL1O95841 491 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 RNF224P0DH78 156 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 NPIPA8P0DM63 369 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 GDF1P27539 372 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 PTGS2P35354 604 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 PLAURQ03405 335 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 C17orf67Q0P5P2 114 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 SF3A3Q12874 501 aaKnown RBP eCLIP11.28□□□□□ -0.64e-6■■□□□ 12.9
RNF40-211ENST00000567365 KLF10Q13118 480 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 ZNF141Q15928 474 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 MAPK14Q16539 360 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 TMEM44Q2T9K0 475 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 C4orf17Q53FE4 359 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 EIPR1Q53HC9 387 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 C6orf10Q5SRN2 563 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 OR5M10Q6IEU7 315 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 PRR7Q8TB68 274 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 FAM57AQ8TBR7 257 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 PNPT1Q8TCS8 783 aaKnown RBP11.28□□□□□ -0.6
RNF40-211ENST00000567365 XAGE5Q8WWM1 108 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 OIT3Q8WWZ8 545 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 ROPN1LQ96C74 230 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 ZG16BQ96DA0 208 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
RNF40-211ENST00000567365 KLHDC3Q9BQ90 382 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 HOXD1Q9GZZ0 328 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 POLE3Q9NRF9 147 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 MRGBPQ9NV56 204 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 EXD2Q9NVH0 621 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 LIPT1Q9Y234 373 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 ADGRG4Q8IZF6 3080 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 HEATR5AQ86XA9 2040 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 PHF3Q92576 2039 aaKnown RBP11.27□□□□□ -0.61
RNF40-211ENST00000567365 CLIC1O00299 241 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 SLC22A2O15244 555 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 OIP5O43482 229 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 SNX3O60493 162 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 CDC40O60508 579 aaKnown RBP eCLIP11.27□□□□□ -0.61
RNF40-211ENST00000567365 DNAJA2O60884 412 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 TNFRSF21O75509 655 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 STX11O75558 287 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 UGT2B17O75795 530 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 LDLRP01130 860 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 CHRM4P08173 479 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 SNRPB2P08579 225 aaKnown RBP11.27□□□□□ -0.61
RNF40-211ENST00000567365 TFPTP0C1Z6 253 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 ETFAP13804 333 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 RPS4Y1P22090 263 aaKnown RBP11.27□□□□□ -0.61
RNF40-211ENST00000567365 ADH7P40394 386 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 GFRA1P56159 465 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 RBPJQ06330 500 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 CRYZQ08257 329 aaKnown RBP11.27□□□□□ -0.61
RNF40-211ENST00000567365 FADDQ13158 208 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 RGNQ15493 299 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 SYPL1Q16563 259 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 FLYWCH1Q4VC44 716 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 C1QL3Q5VWW1 255 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 HIST2H2BCQ6DN03 193 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 VASNQ6EMK4 673 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 LRRC74BQ6ZQY2 392 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 SPATA21Q7Z572 469 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 YRDCQ86U90 279 aaKnown RBP11.27□□□□□ -0.61
RNF40-211ENST00000567365 MISPQ8IVT2 679 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 FAM26EQ8N5C1 309 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 ANKFN1Q8N957 763 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 FAM71CQ8NEG0 241 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 DMRTA2Q96SC8 542 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 CPPED1Q9BRF8 314 aaPredicted RBP11.27□□□□□ -0.61
RNF40-211ENST00000567365 TBL1XR1Q9BZK7 514 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 DSN1Q9H410 356 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 RUBCNLQ9H714 662 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 SDHAF3Q9NRP4 125 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 MED11Q9P086 117 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 PPP4R1LQ9P1A2 415 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 LEF1Q9UJU2 399 aaPredicted RBP11.27□□□□□ -0.61
RNF40-211ENST00000567365 TINAGQ9UJW2 476 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 MKLN1Q9UL63 735 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 SLC5A6Q9Y289 635 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 NDUFAF1Q9Y375 327 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 DTNAQ9Y4J8 743 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 DSPPQ9NZW4 1301 aa11.27□□□□□ -0.61
RNF40-211ENST00000567365 A0A1B0GUH1 482 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 GMNCA6NCL1 334 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 FXYD1O00168 92 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 LRRTM2O43300 516 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 NDUFB5O43674 189 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 H6PDO95479 791 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 ANP32DO95626 131 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 GP1BBP13224 206 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 GPX2P18283 190 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 ATP6V1C1P21283 382 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 DPP4P27487 766 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 MSX1P28360 303 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 CLK3P49761 638 aaKnown RBP11.26□□□□□ -0.61
RNF40-211ENST00000567365 DSCR4P56555 118 aaPredicted RBP11.26□□□□□ -0.61
RNF40-211ENST00000567365 CHRNEQ04844 493 aa11.26□□□□□ -0.61
RNF40-211ENST00000567365 STX5Q13190 355 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms