RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 ZIC3O60481 467 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 SPAG7O75391 227 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 ANGPTL1O95841 491 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 CRHP06850 196 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 FGF4P08620 206 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 ALOX5P09917 674 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 SDC1P18827 310 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 ALDH3A1P30838 453 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 CPOXP36551 454 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 SERPINB5P36952 375 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 KCNJ5P48544 419 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 SERPINB4P48594 390 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 PRIM2P49643 509 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 ZNF41P51814 821 aaPredicted RBP9.37□□□□□ -0.91
LINC00564-201ENST00000567258 IST1P53990 364 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 GAS1P54826 345 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 CLDN18P56856 261 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 RIPPLY3P57055 190 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 PPP2R2AP63151 447 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 FGFBP1Q14512 234 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 DAZAP2Q15038 168 aaPredicted RBP9.37□□□□□ -0.91
LINC00564-201ENST00000567258 KIAA0040Q15053 153 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 GLYR1Q49A26 553 aaPredicted RBP9.37□□□□□ -0.91
LINC00564-201ENST00000567258 RFTN2Q52LD8 501 aaPredicted RBP9.37□□□□□ -0.91
LINC00564-201ENST00000567258 KANK2Q63ZY3 851 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 ZCCHC12Q6PEW1 402 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 POMZP3Q6PJE2 187 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 RNF165Q6ZSG1 346 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 MARCH3Q86UD3 253 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 TRABD2AQ86V40 505 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 KRTAP19-1Q8IUB9 90 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 NATD1Q8N6N6 113 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 COX18Q8N8Q8 333 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 FADS6Q8N9I5 356 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 BANPQ8N9N5 519 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 OR6Y1Q8NGX8 325 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 OR2W6PQ8NHA6 318 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 CLHC1Q8NHS4 586 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 LINC01560Q8TB33 94 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 AGR3Q8TD06 166 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 SMPDL3BQ92485 455 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 CIDECQ96AQ7 238 aaPredicted RBP9.37□□□□□ -0.91
LINC00564-201ENST00000567258 MS4A4EQ96PG1 132 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 G6PC3Q9BUM1 346 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 PINK1Q9BXM7 581 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 NEUROD4Q9HD90 331 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 TNFRSF12AQ9NP84 129 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 CLCF1Q9UBD9 225 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 BAIAP2L1Q9UHR4 511 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 ST6GALNAC2Q9UJ37 374 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 EIF3LQ9Y262 564 aaKnown RBP9.37□□□□□ -0.91
LINC00564-201ENST00000567258 CCL27Q9Y4X3 112 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 DNAJC15Q9Y5T4 150 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 SNX8Q9Y5X2 465 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 PTGDR2Q9Y5Y4 395 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 MAP1AP78559 2803 aaPredicted RBP9.37□□□□□ -0.91
LINC00564-201ENST00000567258 SH3D21A4FU49 640 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 SCDO00767 359 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 PIP5K1BO14986 540 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 LSM1O15116 133 aaKnown RBP9.36□□□□□ -0.91
LINC00564-201ENST00000567258 TBX19O60806 448 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 PEX11AO75192 247 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 TNFRSF21O75509 655 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 SOX30O94993 753 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 PSMG1O95456 288 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 HSPA4LO95757 839 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 PLGP00747 810 aaPredicted RBP9.36□□□□□ -0.91
LINC00564-201ENST00000567258 NUDT17P0C025 328 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 FCGR2AP12318 317 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 ATP6V1C1P21283 382 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 ME2P23368 584 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 LCN1P31025 176 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 FOXF2Q12947 444 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 MAD2L1Q13257 205 aaPredicted RBP9.36□□□□□ -0.91
LINC00564-201ENST00000567258 KEAP1Q14145 624 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 TESK1Q15569 626 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 PRSS53Q2L4Q9 553 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 GRAMD1BQ3KR37 738 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 LSM12Q3MHD2 195 aaKnown RBP9.36□□□□□ -0.91
LINC00564-201ENST00000567258 SPDYE7PQ495Y7 208 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 ARL13AQ5H913 290 aaPredicted RBP9.36□□□□□ -0.91
LINC00564-201ENST00000567258 PDSS1Q5T2R2 415 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 EMBQ6PCB8 327 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 Q6ZSR9 355 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 CAMKMTQ7Z624 323 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 ADGRE4PQ86SQ3 457 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 CDC20BQ86Y33 519 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 ZNF527Q8NB42 609 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 OR2T11Q8NH01 316 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 TCP10LQ8TDR4 215 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 RNF138Q8WVD3 245 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 PIK3R3Q92569 461 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 NRGNQ92686 78 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 C1GALT1C1Q96EU7 318 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 DACH2Q96NX9 599 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 FOXC2Q99958 501 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 SLC39A3Q9BRY0 314 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 ANKZF1Q9H8Y5 726 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 FANCFQ9NPI8 374 aa9.36□□□□□ -0.91
LINC00564-201ENST00000567258 CCM2LQ9NUG4 571 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms