RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 LIPGQ9Y5X9 500 aa23.8■■□□□ 1.4
NME3-209ENST00000566600 TRBV5-3A0A0A0MS03 114 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 BBIP1A8MTZ0 92 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 EVPLLA8MZ36 301 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 PRRG2O14669 202 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 FCMRO60667 390 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 NR2F1P10589 423 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 MSX1P28360 303 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 DSCR4P56555 118 aaPredicted RBP23.79■■□□□ 1.4
NME3-209ENST00000566600 GNA13Q14344 377 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 GANABQ14697 944 aaKnown RBP23.79■■□□□ 1.4
NME3-209ENST00000566600 RGNQ15493 299 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 DLEU7Q6UYE1 221 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 DHDDSQ86SQ9 333 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 CHERPQ8IWX8 916 aaKnown RBP23.79■■□□□ 1.4
NME3-209ENST00000566600 MSRB3Q8IXL7 192 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 FAM83FQ8NEG4 500 aaPredicted RBP23.79■■□□□ 1.4
NME3-209ENST00000566600 OR2M3Q8NG83 312 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 PMM1Q92871 262 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 SARAFQ96BY9 339 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 RTN4RQ9BZR6 473 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 OR2B2Q9GZK3 357 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 SAP130Q9H0E3 1048 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 CALML5Q9NZT1 146 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 VAPAQ9P0L0 249 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 DKKL1Q9UK85 242 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 FBXL2Q9UKC9 423 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 MKLN1Q9UL63 735 aa23.79■■□□□ 1.4
NME3-209ENST00000566600 A0A1B0GUH1 482 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 KIAA0513O60268 411 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 ETFAP13804 333 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 DPP4P27487 766 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 FUT5Q11128 374 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 NFYCQ13952 458 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 ZNF141Q15928 474 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 ZNF630Q2M218 657 aaPredicted RBP23.78■■□□□ 1.4
NME3-209ENST00000566600 MMEL1Q495T6 779 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 TYW3Q6IPR3 259 aaKnown RBP23.78■■□□□ 1.4
NME3-209ENST00000566600 LRRC74BQ6ZQY2 392 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 ZNF619Q8N2I2 560 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 OR14L1PQ8NHC6 308 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 FAM57AQ8TBR7 257 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 SLC6A15Q9H2J7 730 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 MED11Q9P086 117 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 FLNCQ14315 2725 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 NCKAP5O14513 1909 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 TENM4Q6N022 2769 aa23.78■■□□□ 1.4
NME3-209ENST00000566600 NPIPA5A0A0B4J1W7 369 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 NPIPA7E9PJI5 369 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 BCKDKO14874 412 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 H6PDO95479 791 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 NPIPA8P0DM63 369 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 SYPL1Q16563 259 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 FRRS1Q6ZNA5 592 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 FGD2Q7Z6J4 655 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 RETREG3Q86VR2 466 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 ZNF614Q8N883 585 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 ANKFN1Q8N957 763 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 GATSQ8NAP1 163 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 PHOSPHO1Q8TCT1 267 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 TAS2R10Q9NYW0 307 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 HRH3Q9Y5N1 445 aa23.77■■□□□ 1.4
NME3-209ENST00000566600 ZNF407Q9C0G0 2248 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 TRGV8A0A0C4DH27 118 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 PRAMEF27A3QJZ7 478 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 NPPAP01160 153 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 BMP2P12643 396 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 CA7P43166 264 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 CYLC2Q14093 348 aaPredicted RBP23.76■■□□□ 1.39
NME3-209ENST00000566600 C4orf17Q53FE4 359 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 RUNDC3AQ59EK9 446 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 MTDHQ86UE4 582 aaKnown RBP23.76■■□□□ 1.39
NME3-209ENST00000566600 SNX32Q86XE0 403 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 EID3Q8N140 333 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 CGREF1Q99674 301 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 MTHFD2LQ9H903 347 aaPredicted RBP23.76■■□□□ 1.39
NME3-209ENST00000566600 ARMCX1Q9P291 453 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 ACAD8Q9UKU7 415 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 SLC5A6Q9Y289 635 aa23.76■■□□□ 1.39
NME3-209ENST00000566600 SERINC4A6NH21 518 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 C17orf51A8MQB3 221 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 NPIPA2E9PIF3 369 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 NPIPA3F8WFD2 350 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 GTPBP1O00178 669 aaKnown RBP23.75■■□□□ 1.39
NME3-209ENST00000566600 FBP2O00757 339 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 UGT2B17O75795 530 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 TPOP07202 933 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 TFPTP0C1Z6 253 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 CRISP3P54108 245 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 CHRNEQ04844 493 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 CD226Q15762 336 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 TRMT5Q32P41 509 aaKnown RBP23.75■■□□□ 1.39
NME3-209ENST00000566600 EIPR1Q53HC9 387 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 WIPI1Q5MNZ9 446 aaPredicted RBP23.75■■□□□ 1.39
NME3-209ENST00000566600 PDZK1Q5T2W1 519 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 PIGWQ7Z7B1 504 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 YRDCQ86U90 279 aaKnown RBP23.75■■□□□ 1.39
NME3-209ENST00000566600 IFNEQ86WN2 208 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 PCYOX1LQ8NBM8 494 aa23.75■■□□□ 1.39
NME3-209ENST00000566600 RP9Q8TA86 221 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms