RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ASMTP46597 345 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 VSNL1P62760 191 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 SIRPAP78324 504 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 PON3Q15166 354 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 XKR7Q5GH72 579 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 CAMKMTQ7Z624 323 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 METTL25Q8N6Q8 603 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 GATSQ8NAP1 163 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 AGR3Q8TD06 166 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 PGM2Q96G03 612 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 NPAS1Q99742 590 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 RNF122Q9H9V4 155 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 ATP6V1HQ9UI12 483 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 ZNF175Q9Y473 711 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 AP4B1Q9Y6B7 739 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 SCAMP2O15127 329 aaKnown RBP16.47■□□□□ 0.23
USB1-213ENST00000566292 NDUFB5O43674 189 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 DIAPH2O60879 1101 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 CGAP01215 116 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 TBXA2RP21731 343 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 PCYT1AP49585 367 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 FOXD4Q12950 439 aaPredicted RBP16.47■□□□□ 0.23
USB1-213ENST00000566292 GUSBP1Q15486 140 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.47■□□□□ 0.23
USB1-213ENST00000566292 DEFB113Q30KQ7 82 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 R3HCC1LQ7Z5L2 792 aaKnown RBP16.47■□□□□ 0.23
USB1-213ENST00000566292 OR7A2PQ8NGA2 310 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 OR6Y1Q8NGX8 325 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 TCP10LQ8TDR4 215 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 NUDT8Q8WV74 236 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 FAM120BQ96EK7 910 aaKnown RBP16.47■□□□□ 0.23
USB1-213ENST00000566292 C3orf30Q96M34 536 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 WFIKKN1Q96NZ8 548 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 KLHDC3Q9BQ90 382 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 EML4Q9HC35 981 aaKnown RBP16.47■□□□□ 0.23
USB1-213ENST00000566292 NDRG3Q9UGV2 375 aa16.47■□□□□ 0.23
USB1-213ENST00000566292 HEATR5AQ86XA9 2040 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 SIAH2O43255 324 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 PEX11AO75192 247 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 AQP8O94778 261 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 ALOX5P09917 674 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 LAMP1P11279 417 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 CREB1P16220 341 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 CCKARP32238 428 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 HPCAL1P37235 193 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 CD79BP40259 229 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 RPS3AP61247 264 aaKnown RBP16.46■□□□□ 0.23
USB1-213ENST00000566292 OCRLQ01968 901 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 KEAP1Q14145 624 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 MLC1Q15049 377 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 CCNJQ5T5M9 372 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 ZCCHC12Q6PEW1 402 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 LRIG3Q6UXM1 1119 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 HOMEZQ8IX15 550 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 PPP3R2Q96LZ3 170 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 C1orf50Q9BV19 199 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 ZDHHC2Q9UIJ5 367 aa16.46■□□□□ 0.23
USB1-213ENST00000566292 TMEM114B3SHH9 223 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 CASKO14936 926 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 SLU7O95391 586 aaKnown RBP16.45■□□□□ 0.22
USB1-213ENST00000566292 HMGN2P05204 90 aaKnown RBP16.45■□□□□ 0.22
USB1-213ENST00000566292 ZNF17P17021 662 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 PSMA4P25789 261 aaKnown RBP16.45■□□□□ 0.22
USB1-213ENST00000566292 SLC6A8P48029 635 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 PPP2R2AP63151 447 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 ADAM8P78325 824 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 LASP1Q14847 261 aaKnown RBP16.45■□□□□ 0.22
USB1-213ENST00000566292 PTGR1Q14914 329 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 GTPBP8Q8N3Z3 284 aaPredicted RBP16.45■□□□□ 0.22
USB1-213ENST00000566292 COX18Q8N8Q8 333 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 JADE3Q92613 823 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 ADGRG7Q96K78 797 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 UBQLN4Q9NRR5 601 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 ZCCHC3Q9NUD5 404 aaKnown RBP16.45■□□□□ 0.22
USB1-213ENST00000566292 KLHL28Q9NXS3 571 aa16.45■□□□□ 0.22
USB1-213ENST00000566292 A0A087WZY1 265 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 A0A1W2PRB8 838 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 DEFB108AA8MXU0 73 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 EIF1AYO14602 144 aaKnown RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 CTIFO43310 598 aaKnown RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 SKAP2O75563 359 aaPredicted RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 CD8BP10966 210 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 POU2F1P14859 743 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 CD53P19397 219 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 MAPK1P28482 360 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 LCN1P31025 176 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 UGT2B10P36537 528 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 EIF1AXP47813 144 aaKnown RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 PRIM2P49643 509 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 POU6F2P78424 691 aaPredicted RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 IFFO1Q0D2I5 559 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 CD226Q15762 336 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 SGCBQ16585 318 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 CTU2Q2VPK5 515 aaKnown RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 PLPPR5Q32ZL2 321 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 ATP6AP1LQ52LC2 224 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 C6orf136Q5SQH8 315 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 ZNF610Q8N9Z0 462 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 POC1BQ8TC44 478 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 AENQ8WTP8 325 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms