RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-229	ENST00000565580		A8MXE2	369 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	NPIPB8	E9PQR5	432 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	EIF1AY	O14602	144 aa	Known RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	SEC14L5	O43304	696 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	GMFG	O60234	142 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	SEC22B	O75396	215 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	CRCP	O75575	148 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	SLITRK5	O94991	958 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	ATE1	O95260	518 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	IL33	O95760	270 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	RAF1	P04049	648 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	HRG	P04196	525 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	UROS	P10746	265 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	CPA3	P15088	417 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	SDC1	P18827	310 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	HK1	P19367	917 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	KLK2	P20151	261 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	EFNA1	P20827	205 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	DNASE1	P24855	282 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	NTS	P30990	170 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	GABRA3	P34903	492 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	CRHR1	P34998	444 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	CPOX	P36551	454 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	MAP3K8	P41279	467 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	KIR2DL2	P43627	348 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	CPA2	P48052	419 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	RFX3	P48380	749 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	PSPH	P78330	225 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	MRPS22	P82650	360 aa	Known RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	FAM27E3	Q08E93	113 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	FOXD4	Q12950	439 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	HSPB3	Q12988	150 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	BCL2A1	Q16548	175 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	DECR1	Q16698	335 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	GRAMD1B	Q3KR37	738 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	CCDC153	Q494R4	210 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	CYP27C1	Q4G0S4	372 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	CFAP157	Q5JU67	520 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	RAET1L	Q5VY80	246 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	FBXW10	Q5XX13	1052 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	APOOL	Q6UXV4	268 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580		Q6ZSR9	355 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	IKBIP	Q70UQ0	350 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	ZAR1	Q86SH2	424 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	GALNT10	Q86SR1	603 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	TDRP	Q86YL5	185 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	C10orf107	Q8IVU9	208 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	C4orf33	Q8N1A6	199 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	POU5F2	Q8N7G0	328 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	CCDC63	Q8NA47	563 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	CLHC1	Q8NHS4	586 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	FAM76A	Q8TAV0	307 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	FBXO30	Q8TB52	745 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	DUSP19	Q8WTR2	217 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	UBLCP1	Q8WVY7	318 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	PIK3R3	Q92569	461 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	MBD6	Q96DN6	1003 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	STARD4	Q96DR4	205 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	C1GALT1C1	Q96EU7	318 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	ZNF845	Q96IR2	970 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	TSSK3	Q96PN8	268 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	ALPK1	Q96QP1	1244 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	NPAS1	Q99742	590 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	KLHDC3	Q9BQ90	382 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	YIPF4	Q9BSR8	244 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	LMF2	Q9BU23	707 aa	Known RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	GATA5	Q9BWX5	397 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	OPN3	Q9H1Y3	402 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	TUBB1	Q9H4B7	451 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	GSX1	Q9H4S2	264 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580		Q9N2J8	555 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	EQTN	Q9NQ60	294 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	RRAGD	Q9NQL2	400 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	OXSM	Q9NWU1	459 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	FAM120C	Q9NX05	1096 aa	Known RBP	5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	PACSIN3	Q9UKS6	424 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	GRID1	Q9ULK0	1009 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	ABCG2	Q9UNQ0	655 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	FIS1	Q9Y3D6	152 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	ZNF337	Q9Y3M9	751 aa		5.74	□□□□□ -1.49
TCF4-229	ENST00000565580	NSD1	Q96L73	2696 aa	Predicted RBP	5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	SLC22A20	A6NK97	555 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	TMEM233	B4DJY2	109 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580		H3BML4	177 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580		H3BQF6	201 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	COPE	O14579	308 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	AZIN1	O14977	448 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	PDPK1	O15530	556 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	AKAP10	O43572	662 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	NKX2-2	O95096	273 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	UTS2	O95399	124 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	ANGPTL1	O95841	491 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	CHRNG	P07510	517 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	LINC00032	P0C843	101 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	ACP2	P11117	423 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	PEPD	P12955	493 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	KRT4	P19013	534 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	CD53	P19397	219 aa		5.73	□□□□□ -1.49
TCF4-229	ENST00000565580	PRPH2	P23942	346 aa		5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms