RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 GLOD5A6NK44 160 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 WASHC1A8K0Z3 465 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 NCF1CA8MVU1 366 aaPredicted RBP8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 UBXN8O00124 270 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 PLIN3O60664 434 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 REM1O75628 298 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 SYNGR4O95473 234 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 NCF1P14598 390 aaPredicted RBP8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF23P17027 643 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 IMPDH1P20839 514 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 DRD5P21918 477 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 GPX3P22352 226 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 GRK2P25098 689 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 PIK3R1P27986 724 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 LIMS1P48059 325 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 FABP6P51161 128 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 RAP1GDS1P52306 607 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 CLDN20P56880 219 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 DNAJB13P59910 316 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 LGALS3BPQ08380 585 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 E2F2Q14209 437 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 P2RY6Q15077 328 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 TBCCQ15814 346 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 PFKFB4Q16877 469 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 AWAT1Q58HT5 328 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 ADCY4Q8NFM4 1077 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 OR52B6Q8NGF0 335 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 KISS1RQ969F8 398 aaPredicted RBP8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 FOXN4Q96NZ1 517 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 JMJD8Q96S16 334 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 MS4A8Q9BY19 250 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 CENPHQ9H3R5 247 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 DSN1Q9H410 356 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 METTL17Q9H7H0 456 aaPredicted RBP8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 CPSF2Q9P2I0 782 aaKnown RBP8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 BCAP29Q9UHQ4 241 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 POU2F3Q9UKI9 436 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 MCTS1Q9ULC4 181 aaKnown RBP8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 PCDHB10Q9UN67 800 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 MGAT4BQ9UQ53 548 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 STK38LQ9Y2H1 464 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 ANGPTL3Q9Y5C1 460 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 PCDHGB1Q9Y5G3 927 aa8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 YLPM1P49750 1951 aaKnown RBP8.02□□□□□ -1.12
VPS9D1-205ENST00000565452 IGHV4-61A0A0C4DH41 118 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 LOC390937A0A1W2PQ73 354 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 E7EQL1 145 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 H3BML4 177 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 SAP18O00422 153 aaKnown RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 ABCD4O14678 606 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 TYROBPO43914 113 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 CCNT2O60583 730 aaKnown RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 SH3BGRLO75368 114 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 GCM2O75603 506 aaPredicted RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 SNUPNO95149 360 aaKnown RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 PROCP04070 461 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 SBK3P0C264 359 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 MYL2P10916 166 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 CPA3P15088 417 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 NT5EP21589 574 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 SERPINB1P30740 379 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 KRT20P35900 424 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 PPICP45877 212 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 EIF1AXP47813 144 aaKnown RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 SLC6A8P48029 635 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 HSPA7P48741 367 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 XKP51811 444 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 ITGADQ13349 1161 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 EFR3AQ14156 821 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 GANABQ14697 944 aaKnown RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 TSC22D1Q15714 1073 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 NNATQ16517 81 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 CARTPTQ16568 116 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 PDK4Q16654 411 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 GLYR1Q49A26 553 aaPredicted RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 KHDRBS2Q5VWX1 349 aaKnown RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 LIPJQ5W064 366 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 ADNP2Q6IQ32 1131 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 MFSD12Q6NUT3 480 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 SLC22A25Q6T423 547 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 ZYG11AQ6WRX3 759 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 DEF8Q6ZN54 512 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 Q6ZSR9 355 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 ATG4DQ86TL0 474 aaPredicted RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 C4orf33Q8N1A6 199 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 GABRG1Q8N1C3 465 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 PIAS4Q8N2W9 510 aaPredicted RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 ZCCHC7Q8N3Z6 543 aaKnown RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 LINC01356Q8N9X3 169 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 OR4K14Q8NGD5 310 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 ZNF473Q8WTR7 871 aaKnown RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 PHF21BQ96EK2 531 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 L3HYPDHQ96EM0 354 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 WDR34Q96EX3 536 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 BTBD9Q96Q07 612 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 HBEGFQ99075 208 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 POTEKPQ9BYX7 375 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 C12orf49Q9H741 205 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 PTGES2Q9H7Z7 377 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms