RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 STARD4Q96DR4 205 aa16.69■□□□□ 0.26
CLN6-204ENST00000564752 PGM2Q96G03 612 aa16.69■□□□□ 0.26
CLN6-204ENST00000564752 SDHAF3Q9NRP4 125 aa16.69■□□□□ 0.26
CLN6-204ENST00000564752 ATAD3AQ9NVI7 634 aa16.69■□□□□ 0.26
CLN6-204ENST00000564752 FAM120CQ9NX05 1096 aaKnown RBP16.69■□□□□ 0.26
CLN6-204ENST00000564752 FLRT3Q9NZU0 649 aa16.69■□□□□ 0.26
CLN6-204ENST00000564752 EIF3LQ9Y262 564 aaKnown RBP16.69■□□□□ 0.26
CLN6-204ENST00000564752 FLNAP21333 2647 aaKnown RBP16.68■□□□□ 0.26
CLN6-204ENST00000564752 GXYLT2A0PJZ3 443 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 MSTNO14793 375 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 CASKO14936 926 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 EMC8O43402 210 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 SNUPNO95149 360 aaKnown RBP16.68■□□□□ 0.26
CLN6-204ENST00000564752 DHRS4L1P0CG22 281 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 HOXB4P17483 251 aaPredicted RBP16.68■□□□□ 0.26
CLN6-204ENST00000564752 PCYT1AP49585 367 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 MAD2L1Q13257 205 aaPredicted RBP16.68■□□□□ 0.26
CLN6-204ENST00000564752 MLC1Q15049 377 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 POU4F3Q15319 338 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 OR2A2Q6IF42 318 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 CHMP1BQ7LBR1 199 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 P4HA3Q7Z4N8 544 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 SMPDL3BQ92485 455 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 HOXB13Q92826 284 aaPredicted RBP16.68■□□□□ 0.26
CLN6-204ENST00000564752 PPP1R36Q96LQ0 422 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 TBL1XR1Q9BZK7 514 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 RTN4RQ9BZR6 473 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 GSX1Q9H4S2 264 aaPredicted RBP16.68■□□□□ 0.26
CLN6-204ENST00000564752 ZCCHC3Q9NUD5 404 aaKnown RBP16.68■□□□□ 0.26
CLN6-204ENST00000564752 MED11Q9P086 117 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 NTMQ9P121 344 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 NDRG3Q9UGV2 375 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 RAP2CQ9Y3L5 183 aa16.68■□□□□ 0.26
CLN6-204ENST00000564752 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 A0A1W2PRB8 838 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 SLC22A20A6NK97 555 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 LINC01387J3KSC0 135 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 ERLIN1O75477 346 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 NKX2-2O95096 273 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 UTS2O95399 124 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 LAMP1P11279 417 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 HK1P19367 917 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 CD53P19397 219 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 PRPS1L1P21108 318 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 BGNP21810 368 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 HOXC12P31275 282 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 SLC1A6P48664 564 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 PRIM2P49643 509 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 EEFSECP57772 596 aaKnown RBP16.67■□□□□ 0.26
CLN6-204ENST00000564752 FAM27E3Q08E93 113 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 GANABQ14697 944 aaKnown RBP16.67■□□□□ 0.26
CLN6-204ENST00000564752 CPTPQ5TA50 214 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 MFSD12Q6NUT3 480 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 UBQLNLQ8IYU4 475 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 KIRREL3Q8IZU9 778 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 MEIOBQ8N635 442 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 WFDC11Q8NEX6 87 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 JADE3Q92613 823 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 FAM120BQ96EK7 910 aaKnown RBP16.67■□□□□ 0.26
CLN6-204ENST00000564752 GIMAP5Q96F15 307 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 PRPF18Q99633 342 aaKnown RBP16.67■□□□□ 0.26
CLN6-204ENST00000564752 PAIP2Q9BPZ3 127 aaKnown RBP16.67■□□□□ 0.26
CLN6-204ENST00000564752 ZNF395Q9H8N7 513 aaPredicted RBP16.67■□□□□ 0.26
CLN6-204ENST00000564752 SIRT3Q9NTG7 399 aaPredicted RBP16.67■□□□□ 0.26
CLN6-204ENST00000564752 NOP53Q9NZM5 478 aaKnown RBP16.67■□□□□ 0.26
CLN6-204ENST00000564752 ZNF337Q9Y3M9 751 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 TESMINQ9Y4I5 508 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 SNX8Q9Y5X2 465 aa16.67■□□□□ 0.26
CLN6-204ENST00000564752 H0YC42 278 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 TNFRSF21O75509 655 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 IGKV1D-16P01601 117 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 ALOX5P09917 674 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 ACP2P11117 423 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 G6PDP11413 515 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 MAP3K8P41279 467 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 KIR2DL2P43627 348 aaPredicted RBP16.66■□□□□ 0.26
CLN6-204ENST00000564752 SUCLG1P53597 346 aaKnown RBP16.66■□□□□ 0.26
CLN6-204ENST00000564752 TPD52P55327 224 aaPredicted RBP16.66■□□□□ 0.26
CLN6-204ENST00000564752 MPP2Q14168 576 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 RAET1LQ5VY80 246 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 ZCCHC12Q6PEW1 402 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 KRTCAP2Q8N6L1 136 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 NATD1Q8N6N6 113 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 CNEP1R1Q8N9A8 125 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 ANKRD42Q8N9B4 389 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 DUSP19Q8WTR2 217 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 FIG4Q92562 907 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 CHMP6Q96FZ7 201 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 PTGES2Q9H7Z7 377 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 NEUROD4Q9HD90 331 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.66■□□□□ 0.26
CLN6-204ENST00000564752 MED12LQ86YW9 2145 aa16.66■□□□□ 0.26
CLN6-204ENST00000564752 SMNDC1O75940 238 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLN6-204ENST00000564752 CPOXP36551 454 aa16.65■□□□□ 0.26
CLN6-204ENST00000564752 RPL14P50914 215 aaKnown RBP16.65■□□□□ 0.26
CLN6-204ENST00000564752 EMX2Q04743 252 aa16.65■□□□□ 0.26
CLN6-204ENST00000564752 STX3Q13277 289 aa16.65■□□□□ 0.26
CLN6-204ENST00000564752 DUSP5Q16690 384 aa16.65■□□□□ 0.26
CLN6-204ENST00000564752 SMU1Q2TAY7 513 aa16.65■□□□□ 0.26
CLN6-204ENST00000564752 GRAMD1BQ3KR37 738 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms