RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 ESPNLQ6ZVH7 1005 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 CTAGE3PQ8IX95 158 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 TUSC5Q8IXB3 177 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 MUC15Q8N387 334 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 CDYL2Q8N8U2 506 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 SGMS2Q8NHU3 365 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 ACTRT1Q8TDG2 376 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 PYROXD1Q8WU10 500 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 ABHD3Q8WU67 409 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 EXOSC8Q96B26 276 aaKnown RBP6.49□□□□□ -1.37
VPS4A-203ENST00000564399 ZMYND19Q96E35 227 aaPredicted RBP6.49□□□□□ -1.37
VPS4A-203ENST00000564399 RADILQ96JH8 1075 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 ADGRG7Q96K78 797 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 HBEGFQ99075 208 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 DHRS9Q9BPW9 319 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 TRIM31Q9BZY9 425 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 ELOVL6Q9H5J4 265 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 L2HGDHQ9H9P8 463 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 CPSF2Q9P2I0 782 aaKnown RBP6.49□□□□□ -1.37
VPS4A-203ENST00000564399 MRTO4Q9UKD2 239 aaKnown RBP6.49□□□□□ -1.37
VPS4A-203ENST00000564399 JRKLQ9Y4A0 524 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 TNPO3Q9Y5L0 923 aaKnown RBP6.49□□□□□ -1.37
VPS4A-203ENST00000564399 WNK2Q9Y3S1 2297 aa6.49□□□□□ -1.37
VPS4A-203ENST00000564399 MEGF8Q7Z7M0 2845 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 A0A087WZY1 265 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 E7EQL1 145 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 PLOD3O60568 738 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 COQ9O75208 318 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 LY6HO94772 140 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 UTS2O95399 124 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 IL33O95760 270 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 YES1P07947 543 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 CTAGE8P0CG41 777 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 BMP4P12644 408 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 CRABP2P29373 138 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 SFTPDP35247 375 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 PDLIM4P50479 330 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 ZNF41P51814 821 aaPredicted RBP6.48□□□□□ -1.37
VPS4A-203ENST00000564399 PSMD4P55036 377 aaKnown RBP6.48□□□□□ -1.37
VPS4A-203ENST00000564399 TRA2BP62995 288 aaKnown RBP6.48□□□□□ -1.37
VPS4A-203ENST00000564399 ACTG1P63261 375 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 PSG6Q00889 435 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 CHRNB3Q05901 458 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 GALNT1Q10472 559 aaPredicted RBP6.48□□□□□ -1.37
VPS4A-203ENST00000564399 CSTF3Q12996 717 aaKnown RBP6.48□□□□□ -1.37
VPS4A-203ENST00000564399 RNPS1Q15287 305 aaKnown RBP6.48□□□□□ -1.37
VPS4A-203ENST00000564399 ZNHIT3Q15649 155 aaPredicted RBP6.48□□□□□ -1.37
VPS4A-203ENST00000564399 FAM83EQ2M2I3 478 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 TMEM44Q2T9K0 475 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 FAM174BQ3ZCQ3 159 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 IQCCQ4KMZ1 466 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 CPTPQ5TA50 214 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 GRTP1Q5TC63 336 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 TMEM108Q6UXF1 575 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 Q6ZSR9 355 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 CTAGE4Q8IX94 777 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 SAMD14Q8IZD0 417 aaPredicted RBP6.48□□□□□ -1.37
VPS4A-203ENST00000564399 FAM9CQ8IZT9 166 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 DEPDC4Q8N2C3 294 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 GTPBP8Q8N3Z3 284 aaPredicted RBP6.48□□□□□ -1.37
VPS4A-203ENST00000564399 C1orf52Q8N6N3 182 aaKnown RBP6.48□□□□□ -1.37
VPS4A-203ENST00000564399 C3orf56Q8N813 242 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 PPM1NQ8N819 430 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 OR7G2Q8NG99 324 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 RHEBL1Q8TAI7 183 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 KCTD4Q8WVF5 259 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 KLHL15Q96M94 604 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 RNF145Q96MT1 663 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 BBS4Q96RK4 519 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 NPAS1Q99742 590 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 PIMREGQ9BSJ6 248 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 PRR14Q9BWN1 585 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 Q9N2J8 555 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 TIGARQ9NQ88 270 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 NMRK1Q9NWW6 199 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 KLHL13Q9P2N7 655 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 MGAT4BQ9UQ53 548 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 PMF1-BGLAPU3KQ54 211 aa6.48□□□□□ -1.37
VPS4A-203ENST00000564399 IGLV3-32A0A0A0MS00 114 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 GNG14A0A1W2PPG7 69 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 ZNF814B7Z6K7 855 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 E7ESA3 106 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 H7C417 338 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 OR7A17O14581 309 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 PRKD3O94806 890 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 SEC31AO94979 1220 aaKnown RBP6.47□□□□□ -1.37
VPS4A-203ENST00000564399 PDYNP01213 254 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 IL3P08700 152 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 DHRS4L1P0CG22 281 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 GGT1P19440 569 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 MPIP34949 423 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 ZNF83P51522 516 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 PRR5P85299 388 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 DR1Q01658 176 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 ZNF239Q16600 458 aaKnown RBP6.47□□□□□ -1.37
VPS4A-203ENST00000564399 TCHHL1Q5QJ38 904 aaPredicted RBP6.47□□□□□ -1.37
VPS4A-203ENST00000564399 TIMM23BQ5SRD1 257 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 KLC3Q6P597 504 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 KLHL17Q6TDP4 642 aa6.47□□□□□ -1.37
VPS4A-203ENST00000564399 APOOLQ6UXV4 268 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms