RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 HLA-DQA1Q5Y7H0 255 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 TCTN3Q6NUS6 607 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 FAHD1Q6P587 224 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 TBPL2Q6SJ96 375 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 DEF8Q6ZN54 512 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 DGAT2L6Q6ZPD8 337 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 COX15Q7KZN9 410 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 CMIPQ8IY22 773 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 OFCC1Q8IZS5 231 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 C8orf59Q8N0T1 100 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 ZNF615Q8N8J6 731 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 BMPERQ8N8U9 685 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 ZNF527Q8NB42 609 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 SUMF1Q8NBK3 374 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 GALNT11Q8NCW6 608 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 C17orf47Q8NEP4 570 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 OR10G2Q8NGC3 310 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 VANGL1Q8TAA9 524 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 SLC2A12Q8TD20 617 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 PTPMT1Q8WUK0 201 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 PIK3R3Q92569 461 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 GATA6Q92908 595 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 RMND5BQ96G75 393 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 LIN37Q96GY3 246 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 SENP5Q96HI0 755 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 ALPK1Q96QP1 1244 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 ARHGDIGQ99819 225 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 FNDC11Q9BVV2 318 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 TOR3AQ9H497 397 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 KRCC1Q9NPI7 259 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 SEMA4GQ9NTN9 838 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 OCIAD1Q9NX40 245 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 VNN3Q9NY84 501 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 NCDNQ9UBB6 729 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 CTSFQ9UBX1 484 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 TESQ9UGI8 421 aaKnown RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 MKLN1Q9UL63 735 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 CBLCQ9ULV8 474 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 ASCC3Q8N3C0 2202 aaKnown RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 PRAMEF25A6NGN4 478 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 FRG2CA6NGY1 282 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 VSTM2BA6NLU5 285 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 IDSB3KWA1 339 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 GNB5O14775 395 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 SLC16A6O15403 523 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 FCMRO60667 390 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 TIAF1O95411 115 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 SNAP29O95721 258 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 ADAP00813 363 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 IGKV3-11P04433 115 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 LYNP07948 512 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 DRD5P21918 477 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 LIMS1P48059 325 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 TAS2R41P59536 307 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 EEF1A1P68104 462 aaKnown RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 ADARB1P78563 741 aaKnown RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 ST3GAL3Q11203 375 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 KEAP1Q14145 624 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 TRAM2Q15035 370 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 SF3A2Q15428 464 aaKnown RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 EXOC3L2Q2M3D2 409 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 FGD3Q5JSP0 725 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 DCAF12Q5T6F0 453 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 PRAMEF17Q5VTA0 474 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 UGT2A3Q6UWM9 527 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 WDR53Q7Z5U6 358 aaPredicted RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 TSEN54Q7Z6J9 526 aaKnown RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 B3GNT8Q7Z7M8 397 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 TMEM179BQ7Z7N9 219 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 VRK2Q86Y07 508 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 GRAMD2AQ8IUY3 354 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 SIMC1Q8NDZ2 872 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 OR4C15Q8NGM1 316 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 OR1N1Q8NGS0 311 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 TSLPQ969D9 159 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 SLC38A4Q969I6 547 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 HSPBAP1Q96EW2 488 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 LCORQ96JN0 433 aaPredicted RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 DEPDC7Q96QD5 511 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 APOL4Q9BPW4 351 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 ITPAQ9BY32 194 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 YTHDF1Q9BYJ9 559 aaKnown RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 ULBP3Q9BZM4 244 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 OR8D2Q9GZM6 311 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 ING2Q9H160 280 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 NMNAT1Q9HAN9 279 aaPredicted RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 SMURF2Q9HAU4 748 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 PAPOLBQ9NRJ5 636 aaKnown RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 ACER3Q9NUN7 267 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 FAM118AQ9NWS6 357 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 SLC39A1Q9NY26 324 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 MGAT4BQ9UQ53 548 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 GPR55Q9Y2T6 319 aaPredicted RBP8.97□□□□□ -0.97
UBFD1-202ENST00000563366 HSPE1-MOB4S4R3N1 261 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 TTC28Q96AY4 2481 aa8.97□□□□□ -0.97
UBFD1-202ENST00000563366 LOC100130705A0A1B0GUX0 176 aa8.96□□□□□ -0.98
UBFD1-202ENST00000563366 C2orf92A0A1B0GVN3 265 aa8.96□□□□□ -0.98
UBFD1-202ENST00000563366 CDHR4A6H8M9 788 aa8.96□□□□□ -0.98
UBFD1-202ENST00000563366 SAGE2PA6NJ88 616 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms