RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 FKBP10Q96AY3 582 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 EFHD2Q96C19 240 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-208ENST00000563220 LRFN5Q96NI6 719 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 GAL3ST4Q96RP7 486 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 GABARAPL3Q9BY60 117 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 ULBP3Q9BZM4 244 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 TOR4AQ9NXH8 423 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 PMS2P1A4D2B8 440 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 SYNDIG1LA6NDD5 238 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 FRG2CA6NGY1 282 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 H3BNH8 94 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 BCKDKO14874 412 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 OR10H3O60404 316 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 NTN1O95631 604 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 KLK3P07288 261 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 TGM1P22735 817 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 SLC5A2P31639 672 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 ILKQ13418 452 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 ZNF691Q5VV52 312 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 CDCP2Q5VXM1 449 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 TTC33Q6PID6 262 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 THAP5Q7Z6K1 395 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 C8orf59Q8N0T1 100 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 NFAM1Q8NET5 270 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 DGCR14Q96DF8 476 aaKnown RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 ARSGQ96EG1 525 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 CDC6Q99741 560 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 AKAP7Q9P0M2 348 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 COPS7AQ9UBW8 275 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 NDRG4Q9ULP0 352 aaKnown RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 POFUT2Q9Y2G5 429 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 OXSR1O95747 527 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 HTR2AP28223 471 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 ISL1P61371 349 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 RPP38P78345 283 aaKnown RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 RAPSNQ13702 412 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 DECR1Q16698 335 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 ISXQ2M1V0 245 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 PGBD2Q6P3X8 592 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 Q6ZPB1 254 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 PLEKHM3Q6ZWE6 761 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 SATL1Q86VE3 508 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 ZNF786Q8N393 782 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 METTL21AQ8WXB1 218 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 MR1Q95460 341 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 WDR77Q9BQA1 342 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 CRB3Q9BUF7 120 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 WWTR1Q9GZV5 400 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 ZNF556Q9HAH1 456 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 VCX3AQ9NNX9 186 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 FLRT3Q9NZU0 649 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 ZNF223Q9UK11 482 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-208ENST00000563220 MYRFQ9Y2G1 1151 aa16.65■□□□□ 0.26
COMMD4-208ENST00000563220 A0A087WUU8 490 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 CDC14CA4D256 554 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 IL33O95760 270 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 DCAF7P61962 342 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 ST3GAL3Q11203 375 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 KLHL17Q6TDP4 642 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 TMEM205Q6UW68 189 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 FAM198BQ6UWH4 519 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 ZNF517Q6ZMY9 492 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-208ENST00000563220 RAB11FIP2Q7L804 512 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 GDF7Q7Z4P5 450 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 LSRQ86X29 649 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-208ENST00000563220 PRR22Q8IZ63 422 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 NR4A3Q92570 626 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 SLC41A3Q96GZ6 507 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 STRADBQ9C0K7 418 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 ARMC7Q9H6L4 198 aa16.64■□□□□ 0.25
COMMD4-208ENST00000563220 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-208ENST00000563220 KIF26BQ2KJY2 2108 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 SAGE2PA6NJ88 616 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 ADAM11O75078 769 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 ELK4P28324 431 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 NR0B1P51843 470 aaKnown RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 CD47Q08722 323 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 DYNC1I2Q13409 638 aaKnown RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 KEAP1Q14145 624 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 FGFBP1Q14512 234 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 TRAM2Q15035 370 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 BORAQ6PGQ7 559 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 ZER1Q7Z7L7 766 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 SLCO6A1Q86UG4 719 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 GRAMD2AQ8IUY3 354 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 CCDC71Q8IV32 467 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 NKAIN4Q8IVV8 208 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 ZNF441Q8N8Z8 693 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 GALNT6Q8NCL4 622 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 APCDD1LQ8NCL9 501 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 OR4K5Q8NGD3 323 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 C8orf44Q96CB5 159 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 SH3GL3Q99963 347 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 SEMA4CQ9C0C4 833 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 WDR54Q9H977 334 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 LIN28AQ9H9Z2 209 aaKnown RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 DNAJB12Q9NXW2 375 aaKnown RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 MGAT4BQ9UQ53 548 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 GMPPBQ9Y5P6 360 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 WDFY3Q8IZQ1 3526 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms