RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 NLGN4YQ8NFZ3 816 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-205ENST00000562310 NACC2Q96BF6 587 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 PHOX2BQ99453 314 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 FNDC11Q9BVV2 318 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 GPR87Q9BY21 358 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 NMNAT1Q9HAN9 279 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-205ENST00000562310 UBQLN4Q9NRR5 601 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 FOXJ2Q9P0K8 574 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 KCNE5Q9UJ90 142 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 A4GNTQ9UNA3 340 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 SLC35A3Q9Y2D2 325 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 CHST2Q9Y4C5 530 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 IGHV1-45A0A0A0MS14 117 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 CENPVL1A0A0U1RR11 272 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 H0YAE9 185 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 SCDO00767 359 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 FFAR1O14842 300 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ABCB7O75027 752 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ZFAND5O76080 213 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 CCNB2O95067 398 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 OR5F1O95221 314 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 TCN2P20062 427 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 IGFBP5P24593 272 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 STAT5AP42229 794 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 PNLIPRP2P54317 469 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 TAS2R41P59536 307 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 TARDBPQ13148 414 aaKnown RBP eCLIP13.17□□□□□ -0.3
COMMD4-205ENST00000562310 MICAQ29983 383 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 NHSL2Q5HYW2 709 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 FGD3Q5JSP0 725 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 PLEKHM3Q6ZWE6 761 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ASCL5Q7RTU5 278 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ZNF550Q7Z398 422 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 TIPARPQ7Z3E1 657 aaKnown RBP13.17□□□□□ -0.3
COMMD4-205ENST00000562310 RBM45Q8IUH3 476 aaKnown RBP13.17□□□□□ -0.3
COMMD4-205ENST00000562310 HS3ST5Q8IZT8 346 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 GALNT15Q8N3T1 639 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 DHRSXQ8N5I4 330 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ZNF614Q8N883 585 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ATG16L2Q8NAA4 619 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 OR10G2Q8NGC3 310 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 EFHD2Q96C19 240 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-205ENST00000562310 C8orf44Q96CB5 159 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 OMA1Q96E52 524 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ALPK1Q96QP1 1244 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 MCHR1Q99705 422 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ZNF559Q9BR84 538 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ADI1Q9BV57 179 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 POLR1BQ9H9Y6 1135 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ENOPH1Q9UHY7 261 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 ZNF223Q9UK11 482 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-205ENST00000562310 TCFL5Q9UL49 500 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 HS3ST3B1Q9Y662 390 aa13.17□□□□□ -0.3
COMMD4-205ENST00000562310 EP300Q09472 2414 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-205ENST00000562310 SERINC4A6NH21 518 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 H3BNH8 94 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 STMND1H3BQB6 276 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 DLGAP1O14490 977 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 TM4SF5O14894 197 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 TSPAN2O60636 221 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 RAD1O60671 282 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 REM1O75628 298 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 UTS2O95399 124 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 COX6A1P12074 109 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 HPGDP15428 266 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 NAGAP17050 411 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 TBXA2RP21731 343 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 ELAVL4P26378 380 aaKnown RBP13.16□□□□□ -0.3
COMMD4-205ENST00000562310 ABCD3P28288 659 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 CAPGP40121 348 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 ADH7P40394 386 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 TMED10P49755 219 aaKnown RBP13.16□□□□□ -0.3
COMMD4-205ENST00000562310 NOVA1P51513 510 aaKnown RBP13.16□□□□□ -0.3
COMMD4-205ENST00000562310 ZNF136P52737 540 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 ST3GAL3Q11203 375 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 MERTKQ12866 999 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 PPP1R8Q12972 351 aaKnown RBP13.16□□□□□ -0.3
COMMD4-205ENST00000562310 DNASE1L3Q13609 305 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 EFR3AQ14156 821 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 TRAM2Q15035 370 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 DCST1Q5T197 706 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 C6orf52Q5T4I8 152 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 KDM4DQ6B0I6 523 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 PLAG1Q6DJT9 500 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 MARVELD2Q8N4S9 558 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 M1APQ8TC57 530 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 TFAP2CQ92754 450 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 ZNF570Q96NI8 536 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 NR1H4Q96RI1 486 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-205ENST00000562310 ANKRD60Q9BZ19 345 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 ZNF556Q9HAH1 456 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 SMURF2Q9HAU4 748 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 RLIMQ9NVW2 624 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 FARSAQ9Y285 508 aaKnown RBP13.16□□□□□ -0.3
COMMD4-205ENST00000562310 MAGED1Q9Y5V3 778 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-205ENST00000562310 FRYLO94915 3013 aa13.16□□□□□ -0.3
COMMD4-205ENST00000562310 PTPRBP23467 1997 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 A0A1W2PQD3 144 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 OR6C70A6NIJ9 312 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 CLDN24A6NM45 220 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms