RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 CHMP1BQ7LBR1 199 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 WDR75Q8IWA0 830 aaKnown RBP8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 RIMKLAQ8IXN7 391 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 CNEP1R1Q8N9A8 125 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 OR4A15Q8NGL6 344 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 MBD3L2Q8NHZ7 208 aaPredicted RBP8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 ZPLD1Q8TCW7 415 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 ADAMTS15Q8TE58 950 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 COQ8BQ96D53 544 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 C1GALT1C1Q96EU7 318 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 OR7D2Q96RA2 312 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 PINK1Q9BXM7 581 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 DPY30Q9C005 99 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 SERHL2Q9H4I8 314 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 PTGES2Q9H7Z7 377 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 SSU72Q9NP77 194 aaKnown RBP8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 CRIM1Q9NZV1 1036 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 CLEC4AQ9UMR7 237 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 PCDHGB3Q9Y5G1 929 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 RNF103-CHMP3A0A140T963 221 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 FAM47E-STBD1D6RA91 191 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 SCDO00767 359 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 EIF1AYO14602 144 aaKnown RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 NUDT14O95848 222 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 ALDOCP09972 364 aaKnown RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 PEPDP12955 493 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 LBPP18428 481 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 PRPS1L1P21108 318 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 ATP6V1C1P21283 382 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 TIMP3P35625 211 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 CPOXP36551 454 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 RPL3P39023 403 aaKnown RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 KIR2DL3P43628 341 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 CPA2P48052 419 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 ASCL1P50553 236 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 UFM1P61960 85 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 C17orf67Q0P5P2 114 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 LSM12Q3MHD2 195 aaKnown RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 SPANXN4Q5MJ08 99 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 BEND6Q5SZJ8 279 aaPredicted RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 DCST2Q5T1A1 773 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 NXNQ6DKJ4 435 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 VWA1Q6PCB0 445 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 CDH24Q86UP0 819 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 ACBD4Q8NC06 268 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 ATP6V1C2Q8NEY4 427 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 OR56A1Q8NGH5 318 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 FAM110BQ8TC76 370 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 PHOSPHO1Q8TCT1 267 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 RAB8BQ92930 207 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 RNASE6Q93091 150 aaKnown RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 ARL8AQ96BM9 186 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 C14orf79Q96F83 325 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 PGM2Q96G03 612 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 ZNF764Q96H86 408 aaPredicted RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 SLC35G5Q96KT7 338 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 TEX37Q96LM6 180 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 PRPF18Q99633 342 aaKnown RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 SH3GL2Q99962 352 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 TREX2Q9BQ50 279 aaPredicted RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 GPATCH1Q9BRR8 931 aaKnown RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 BTBD2Q9BX70 525 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 ACTRT3Q9BYD9 372 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 BHLHE41Q9C0J9 482 aaPredicted RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 LIME1Q9H400 295 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 PIGUQ9H490 435 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 CALHM2Q9HA72 323 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 TMBIM4Q9HC24 238 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 MCCC2Q9HCC0 563 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 ATAD3AQ9NVI7 634 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 GPATCH2Q9NW75 528 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 NOP53Q9NZM5 478 aaKnown RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 CLCF1Q9UBD9 225 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 FAF1Q9UNN5 650 aaPredicted RBP8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 ABCG2Q9UNQ0 655 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 CARD8Q9Y2G2 431 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 DCHS2Q6V1P9 2916 aa8.55□□□□□ -1.04
NSMCE1-203ENST00000562039 CSMD2Q7Z408 3487 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 CENPVL1A0A0U1RR11 272 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 SLC22A20A6NK97 555 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 ENO4A6NNW6 628 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 ALG1L2C9J202 215 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 SDHDO14521 159 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 HCRTR2O43614 444 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 ERLIN1O75477 346 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 TNFRSF21O75509 655 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 CYP7B1O75881 506 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 GSNP06396 782 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 DDX5P17844 614 aaKnown RBP8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 IL11P20809 199 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 TBXA2RP21731 343 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 MATN1P21941 496 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 CHMP24386 653 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 EPHA3P29320 983 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 EIF1AXP47813 144 aaKnown RBP8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 CCR4P51679 360 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 PSPHP78330 225 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 PHC1P78364 1004 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 MAD2L1Q13257 205 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms