RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 ATP12AP54707 1039 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 GAS1P54826 345 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 DSCR4P56555 118 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 SQLEQ14534 574 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 SF3B4Q15427 424 aaKnown RBP eCLIP8.21□□□□□ -1.13e-9■■■■□ 24.3
SNRPA1-214ENST00000560987 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 ARHGAP11BQ3KRB8 267 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 TIGD2Q4W5G0 525 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 SAXO2Q658L1 398 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 AAGABQ6PD74 315 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 ENPP6Q6UWR7 440 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 APOOLQ6UXV4 268 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 DNAJC14Q6Y2X3 702 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 ZAR1Q86SH2 424 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 IFNEQ86WN2 208 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 RNF130Q86XS8 419 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 PM20D2Q8IYS1 436 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 OR2M3Q8NG83 312 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 HOXB13Q92826 284 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 NEURL3Q96EH8 262 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 CCDC120Q96HB5 630 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 SH3YL1Q96HL8 342 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 SFXN2Q96NB2 322 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 TIMP4Q99727 224 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 TMEM120AQ9BXJ8 343 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 HHATLQ9HCP6 504 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 FGFR1OP2Q9NVK5 253 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 SPRR3Q9UBC9 169 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 MKLN1Q9UL63 735 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 HRH3Q9Y5N1 445 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 COL12A1Q99715 3063 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 HECTD1Q9ULT8 2610 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 DNAJC13O75165 2243 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 EXPH5Q8NEV8 1989 aa8.21□□□□□ -1.1
SNRPA1-214ENST00000560987 TMEM247A6NEH6 219 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 WIPF3A6NGB9 483 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 C17orf51A8MQB3 221 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 AHRRA9YTQ3 701 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 ALG1L2C9J202 215 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 HCRTR2O43614 444 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 ZIC3O60481 467 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 WDR1O75083 606 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 ACTL6AO96019 429 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 AK1P00568 194 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 HOXD4P09016 255 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 ACVR2AP27037 513 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 MSX1P28360 303 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 DCTP40126 519 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 STARP49675 285 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 ATP4BP51164 291 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 HPCAP84074 193 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 RCAN2Q14206 197 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 EMC4Q5J8M3 183 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 C1orf185Q5T7R7 199 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 RAET1LQ5VY80 246 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 VASNQ6EMK4 673 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 XKRXQ6PP77 449 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 SLC2A7Q6PXP3 512 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 BLOC1S3Q6QNY0 202 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 RPTNQ6XPR3 784 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 B3GNT6Q6ZMB0 384 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 MSANTD1Q6ZTZ1 278 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 NCCRP1Q6ZVX7 275 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 MAMDC2Q7Z304 686 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 MISPQ8IVT2 679 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 CHERPQ8IWX8 916 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 OR5M1Q8NGP8 315 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 GOT1L1Q8NHS2 421 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 B4GALNT2Q8NHY0 566 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 CA5BP1Q8WTZ4 195 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 RND1Q92730 232 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 ROPN1LQ96C74 230 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 SDCCAG3Q96C92 435 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 SPDL1Q96EA4 605 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 TRIB1Q96RU8 372 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 SIKE1Q9BRV8 207 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 UGT2B28Q9BY64 529 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 RTN4RQ9BZR6 473 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 UBQLN3Q9H347 655 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 STOML1Q9UBI4 398 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 VDAC3Q9Y277 283 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 CARD8Q9Y2G2 431 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 MRPS18CQ9Y3D5 142 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 WDR45Q9Y484 360 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 DTNAQ9Y4J8 743 aa8.2□□□□□ -1.1
SNRPA1-214ENST00000560987 DIDO1Q9BTC0 2240 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 H0Y3Z8 333 aa8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 CLIC1O00299 241 aa8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 FCMRO60667 390 aa8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 C1QCP02747 245 aa8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 NGFRP08138 427 aa8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 RNF224P0DH78 156 aa8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 ENDOUP21128 410 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 CCR4P51679 360 aa8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 ZNF41P51814 821 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 NUP107P57740 925 aa8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 IRX1P78414 480 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 SYPL1Q16563 259 aa8.19□□□□□ -1.1
SNRPA1-214ENST00000560987 ZNF630Q2M218 657 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms