RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ZNF350Q9GZX5 532 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 OR51I1Q9H343 314 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 PTGES2Q9H7Z7 377 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 TPT1P8Q9HAU6 139 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 TMEM181Q9P2C4 612 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 STX18Q9P2W9 335 aaKnown RBP12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 CD300AQ9UGN4 299 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 PACSIN3Q9UKS6 424 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 SPENQ96T58 3664 aaKnown RBP12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 IGLV3-32A0A0A0MS00 114 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 A0A0G2JMM0 328 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 A0A1W2PPB8 328 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 A0A1W2PRS3 328 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 TMEM247A6NEH6 219 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 KIR3DP1A8MWS1 328 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 G3V3Y1 287 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 H0Y3Z8 333 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 AQP7O14520 342 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 FKBP6O75344 327 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 NME6O75414 186 aaPredicted RBP12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 NPPAP01160 153 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 HPNP05981 417 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 ME2P23368 584 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 MSX1P28360 303 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 PTPN6P29350 595 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 CDKN2CP42773 168 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 MAGEA5P43359 124 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 ATP12AP54707 1039 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 KCNC4Q03721 635 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 RCN1Q15293 331 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 IGFBP7Q16270 282 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 RNFT1Q5M7Z0 435 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 FNDC7Q5VTL7 733 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 Q6ZPB1 254 aaPredicted RBP12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 OR52N2Q8NGI0 321 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 STMN2Q93045 179 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 TRNT1Q96Q11 434 aaKnown RBP12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 SDF2Q99470 211 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 CALML5Q9NZT1 146 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 PPP4R1LQ9P1A2 415 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 ZNF835Q9Y2P0 537 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 EML6Q6ZMW3 1958 aa12.77□□□□□ -0.37
PKNOX1-209ENST00000560448 A0A1B0GUH1 482 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 ACOT8O14734 319 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 BCKDKO14874 412 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 NDUFB5O43674 189 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 OXSR1O95747 527 aaPredicted RBP12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 IGKV1D-16P01601 117 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 STSP08842 583 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 GDF1P27539 372 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 RFX3P48380 749 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 GAS1P54826 345 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 MS4A2Q01362 244 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 FLYWCH1Q4VC44 716 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 PAGE3Q5JUK9 113 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 BICRALQ6AI39 1079 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 MTFR2Q6P444 385 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 FIGNL1Q6PIW4 674 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 RNF130Q86XS8 419 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 METTL25Q8N6Q8 603 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 OR5D16Q8NGK9 328 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 FBXO30Q8TB52 745 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 SARAFQ96BY9 339 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 CCDC124Q96CT7 223 aaKnown RBP12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 HOPXQ9BPY8 73 aaPredicted RBP12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 PAIP1Q9H074 479 aaKnown RBP12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 SAP130Q9H0E3 1048 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 SERHL2Q9H4I8 314 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 LDAHQ9H6V9 325 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 GALNT9Q9HCQ5 603 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 S100A14Q9HCY8 104 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 SPAG4Q9NPE6 437 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 ABCD2Q9UBJ2 740 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 P2RX2Q9UBL9 471 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 PCDHB14Q9Y5E9 798 aa12.76□□□□□ -0.37
PKNOX1-209ENST00000560448 TRGV5A0A0B4J1U4 118 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 FAM166BA8MTA8 275 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 LINC01387J3KSC0 135 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 CLIC1O00299 241 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 HMGN4O00479 90 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 PRRG2O14669 202 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC19A2O60779 497 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 ANGPTL1O95841 491 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 OR12D1P0DN82 309 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 BMP2P12643 396 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 HOXB9P17482 250 aaPredicted RBP12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 GNLYP22749 145 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 SRD5A2P31213 254 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 DCTP40126 519 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 ADH7P40394 386 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 RFC3P40938 356 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 DSCR4P56555 118 aaPredicted RBP12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 RPS26P62854 115 aaKnown RBP12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC34A1Q06495 639 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 GRAMD1BQ3KR37 738 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 GLYR1Q49A26 553 aaPredicted RBP12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 NHSL2Q5HYW2 709 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 PRAMEF8Q5VWM4 474 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 PRAMEF7Q5VXH5 474 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 TNFAIP8L2Q6P589 184 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms