RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 PTGDR2Q9Y5Y4 395 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 A0A1W2PQD3 144 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 H3BML4 177 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 RGS16O15492 202 aaPredicted RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 CTIFO43310 598 aaKnown RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 PEX11AO75192 247 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 SPAG7O75391 227 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 NME6O75414 186 aaPredicted RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 SYNGR4O95473 234 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 PLGP00747 810 aaPredicted RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 RAF1P04049 648 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 CHRNGP07510 517 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 PABPC4LP0CB38 370 aaKnown RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 TCEA1P23193 301 aaKnown RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 MAP3K8P41279 467 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 AGFG1P52594 562 aaKnown RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 SUMO3P55854 103 aaPredicted RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 POU6F2P78424 691 aaPredicted RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 FOXF2Q12947 444 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 GRAMD1BQ3KR37 738 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 GTF2IRD2BQ6EKJ0 949 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 PAMR1Q6UXH9 720 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 GTF2IRD2Q86UP8 949 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 CDC20BQ86Y33 519 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 NUDCD3Q8IVD9 361 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 MREGQ8N565 214 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 METTL25Q8N6Q8 603 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 CLHC1Q8NHS4 586 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 SFXN5Q8TD22 340 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 MBD6Q96DN6 1003 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 ZNF845Q96IR2 970 aaPredicted RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 PINK1Q9BXM7 581 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 BHLHE41Q9C0J9 482 aaPredicted RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 PIGUQ9H490 435 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 SSU72Q9NP77 194 aaKnown RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 TIGARQ9NQ88 270 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 NOP53Q9NZM5 478 aaKnown RBP12.71□□□□□ -0.37
TPM1-223ENST00000560445 SLC17A7Q9P2U7 560 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 BAIAP2L1Q9UHR4 511 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 SNX8Q9Y5X2 465 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 MED12Q93074 2177 aa12.71□□□□□ -0.37
TPM1-223ENST00000560445 MED12LQ86YW9 2145 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 C2CD3Q4AC94 2353 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 DUXAA6NLW8 204 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 KDM4EB2RXH2 506 aaPredicted RBP12.7□□□□□ -0.38
TPM1-223ENST00000560445 TM9SF1O15321 606 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 BIRC5O15392 142 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 TNFSF13O75888 250 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 KCNK2O95069 426 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 OXSR1O95747 527 aaPredicted RBP12.7□□□□□ -0.38
TPM1-223ENST00000560445 AK1P00568 194 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 BPGMP07738 259 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 CD8BP10966 210 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 IST1P53990 364 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 KEAP1Q14145 624 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 PON3Q15166 354 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 PRSS53Q2L4Q9 553 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 UGT3A2Q3SY77 523 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 KRT71Q3SY84 523 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 C6orf136Q5SQH8 315 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 ESPNLQ6ZVH7 1005 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 STK32CQ86UX6 486 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 GTPBP8Q8N3Z3 284 aaPredicted RBP12.7□□□□□ -0.38
TPM1-223ENST00000560445 VPS37AQ8NEZ2 397 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 PSMA8Q8TAA3 256 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 AGR3Q8TD06 166 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 ADAMTS15Q8TE58 950 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 PIK3R3Q92569 461 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 FAM120BQ96EK7 910 aaKnown RBP12.7□□□□□ -0.38
TPM1-223ENST00000560445 MECRQ9BV79 373 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 ACTRT3Q9BYD9 372 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 PARD6BQ9BYG5 372 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 CXXC4Q9H2H0 198 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 RNF122Q9H9V4 155 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.7□□□□□ -0.38
TPM1-223ENST00000560445 PCDHGB4Q9UN71 923 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 PROCRQ9UNN8 238 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 ZNF337Q9Y3M9 751 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 V9GYY5 206 aaPredicted RBP12.7□□□□□ -0.38
TPM1-223ENST00000560445 CELSR1Q9NYQ6 3014 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 HIVEP1P15822 2718 aa12.7□□□□□ -0.38
TPM1-223ENST00000560445 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 GXYLT2A0PJZ3 443 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 TMEM233B4DJY2 109 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 CFLARO15519 480 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 TGM6O95932 706 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 AGR2O95994 175 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 SERPINE1P05121 402 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 HMGN2P05204 90 aaKnown RBP12.69□□□□□ -0.38
TPM1-223ENST00000560445 ACP2P11117 423 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 PPP3CBP16298 524 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 ELK4P28324 431 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 CD79BP40259 229 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 KCNJ5P48544 419 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 CCT3P49368 545 aaKnown RBP12.69□□□□□ -0.38
TPM1-223ENST00000560445 CTBP2P56545 445 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 CLDN15P56746 228 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 C21orf58P58505 322 aa12.69□□□□□ -0.38
TPM1-223ENST00000560445 LASP1Q14847 261 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms