RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 POLR3HQ9Y535 204 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 ABCA4P78363 2273 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 PRAMEF25A6NGN4 478 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 EEF1E1-BLOC1S5C9J1V9 151 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 H0Y3Z8 333 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 GNB5O14775 395 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 TO15178 435 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 EEF1E1O43324 174 aaKnown RBP12.35□□□□□ -0.43
SMAD3-214ENST00000560402 SEC22BO75396 215 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 ERAL1O75616 437 aaKnown RBP12.35□□□□□ -0.43
SMAD3-214ENST00000560402 BCAS2O75934 225 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-214ENST00000560402 CYP4B1P13584 511 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 CPN1P15169 458 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 PRPH2P23942 346 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 HTR6P50406 440 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 NME5P56597 212 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 SLC34A1Q06495 639 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 NFYCQ13952 458 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 NNATQ16517 81 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 EIPR1Q53HC9 387 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 WIPI1Q5MNZ9 446 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-214ENST00000560402 TCHHL1Q5QJ38 904 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-214ENST00000560402 IL23RQ5VWK5 629 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 ENPP6Q6UWR7 440 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 ANGPTL8Q6UXH0 198 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 PAMR1Q6UXH9 720 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 Q6ZSR9 355 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 CDC20BQ86Y33 519 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 SAMD14Q8IZD0 417 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-214ENST00000560402 OR2T11Q8NH01 316 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 ZNF675Q8TD23 568 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 SLC26A7Q8TE54 656 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 WDR60Q8WVS4 1066 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 C1orf50Q9BV19 199 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 SFXN3Q9BWM7 321 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 DPY30Q9C005 99 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 OR2B2Q9GZK3 357 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 MUC13Q9H3R2 512 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 KLRF1Q9NZS2 232 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 DTX4Q9Y2E6 619 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 AP3M1Q9Y2T2 418 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 ZNF780BQ9Y6R6 833 aa12.35□□□□□ -0.43
SMAD3-214ENST00000560402 FRG2CA6NGY1 282 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 TUBAL3A6NHL2 446 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 OR6C70A6NIJ9 312 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 KDM4EB2RXH2 506 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-214ENST00000560402 NPIPB8E9PQR5 432 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 DNAJA2O60884 412 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 ERN1O75460 977 aaKnown RBP12.34□□□□□ -0.43
SMAD3-214ENST00000560402 CBR3O75828 277 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 KRT36O76013 467 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 CBX7O95931 251 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 PDYNP01213 254 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 TMIGD3P0DMS9 266 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-214ENST00000560402 EPXP11678 715 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 DRD5P21918 477 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 FEN1P39748 380 aaKnown RBP12.34□□□□□ -0.43
SMAD3-214ENST00000560402 PPICP45877 212 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 DIO3P55073 304 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 WNT3P56703 355 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 MGAT2Q10469 447 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 TRAP1Q12931 704 aaKnown RBP12.34□□□□□ -0.43
SMAD3-214ENST00000560402 BNIP2Q12982 314 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 DCST1Q5T197 706 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 OR9I1Q8NGQ6 314 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 TMCO6Q96DC7 493 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 ASB9Q96DX5 294 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 RSRC1Q96IZ7 334 aaKnown RBP12.34□□□□□ -0.43
SMAD3-214ENST00000560402 LRGUKQ96M69 825 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 UCN2Q96RP3 112 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 TM9SF2Q99805 663 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 JKAMPQ9P055 326 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 GIMAP2Q9UG22 337 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 MCM8Q9UJA3 840 aa12.34□□□□□ -0.43
SMAD3-214ENST00000560402 EXO1Q9UQ84 846 aaKnown RBP12.34□□□□□ -0.43
SMAD3-214ENST00000560402 MPDZO75970 2070 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 FBP2O00757 339 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 ICOSLGO75144 302 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 RAF1P04049 648 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 IL6P05231 212 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 CHMP24386 653 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 VHLP40337 213 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 PTGDSP41222 190 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 GSTM5P46439 218 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 EEF1A1P68104 462 aaKnown RBP12.33□□□□□ -0.44
SMAD3-214ENST00000560402 SNTB1Q13884 538 aaKnown RBP12.33□□□□□ -0.44
SMAD3-214ENST00000560402 EFR3AQ14156 821 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 EXOSC7Q15024 291 aaKnown RBP12.33□□□□□ -0.44
SMAD3-214ENST00000560402 CEBPEQ15744 281 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 DPY19L1Q2PZI1 675 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 VPS26BQ4G0F5 336 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 EEF1A1P5Q5VTE0 462 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 FAM111BQ6SJ93 734 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 ADGRE4PQ86SQ3 457 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 YRDCQ86U90 279 aaKnown RBP12.33□□□□□ -0.44
SMAD3-214ENST00000560402 IFNEQ86WN2 208 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 FUNDC1Q8IVP5 155 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 OR52R1Q8NGF1 315 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 TM4SF18Q96CE8 201 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 SLC35A4Q96G79 324 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms