RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 LOC100289279A0A1B0GTE1 492 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 OR7A17O14581 309 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 ABCD4O14678 606 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 TNFSF11O14788 317 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 TCF21O43680 179 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 GMFGO60234 142 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 CLDN9O95484 217 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 PYGBP11216 843 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 ZNF17P17021 662 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 EGR1P18146 543 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 TTKP33981 857 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 ALDH9A1P49189 494 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 PSG6Q00889 435 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 GALNT1Q10472 559 aaPredicted RBP11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 NAB1Q13506 487 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 P2RY6Q15077 328 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 RAB35Q15286 201 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 PFKFB4Q16877 469 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 TEX35Q5T0J7 233 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 GRTP1Q5TC63 336 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 WDR75Q8IWA0 830 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 CENPLQ8N0S6 344 aaPredicted RBP11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 BANPQ8N9N5 519 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 MSI2Q96DH6 328 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 ERP27Q96DN0 273 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 MRRFQ96E11 262 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 CBLN4Q9NTU7 201 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 FAM120CQ9NX05 1096 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 STOML1Q9UBI4 398 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 UTS2RQ9UKP6 389 aa11.35□□□□□ -0.59
RABGGTA-213ENST00000560127 A0A0J9YW62 118 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 ESPNB1AK53 854 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 E7EQL1 145 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 LTA4HP09960 611 aaKnown RBP11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 ITGA2P17301 1181 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 HNF1AP20823 631 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 MAGEA12P43365 314 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 ALDH18A1P54886 795 aaKnown RBP11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 ITGADQ13349 1161 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 ERCC6LQ2NKX8 1250 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 SH2D4BQ5SQS7 431 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 FRG2Q64ET8 278 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 ESPNLQ6ZVH7 1005 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 BHLHA15Q7RTS1 189 aaPredicted RBP11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 IFT20Q8IY31 132 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 RFLNBQ8N5W9 214 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 OR7G2Q8NG99 324 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 OR2V1Q8NHB1 315 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 ABHD3Q8WU67 409 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 DCAKDQ8WVC6 231 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 CDKL2Q92772 493 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 NXNL1Q96CM4 212 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 FRG2BQ96QU4 278 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 USB1Q9BQ65 265 aaKnown RBP11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 PRR14Q9BWN1 585 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 NPAP1Q9NZP6 1156 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 TXNDC16Q9P2K2 825 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 VDAC3Q9Y277 283 aa11.34□□□□□ -0.59
RABGGTA-213ENST00000560127 GOLGA8QA0A0J9YX86 632 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 GOLGA8OA6NCC3 632 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 SYCE1LA8MT33 242 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 VWC2LB2RUY7 222 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 ZNF814B7Z6K7 855 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 GOLGA8NF8WBI6 632 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 GOLGA8RI6L899 631 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 RIPK2O43353 540 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 KIAA0513O60268 411 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 PLOD3O60568 738 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 LY6HO94772 140 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 ABHD2P08910 425 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 COL6A2P12110 1019 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 GFAPP14136 432 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 PSMA4P25789 261 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 SPRP35270 261 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 RAC1P63000 192 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 PPA1Q15181 289 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 UAP1Q16222 522 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 FAM174BQ3ZCQ3 159 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 CYP27C1Q4G0S4 372 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 TMEM201Q5SNT2 666 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 HBMQ6B0K9 141 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 GTF2IRD2BQ6EKJ0 949 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 APOOLQ6UXV4 268 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 RAPH1Q70E73 1250 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 TBC1D1Q86TI0 1168 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 GTF2IRD2Q86UP8 949 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 TUSC5Q8IXB3 177 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 DEPDC4Q8N2C3 294 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 MUC15Q8N387 334 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 GTPBP8Q8N3Z3 284 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 RHEBL1Q8TAI7 183 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 RNF128Q8TEB7 428 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 OSTF1Q92882 214 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 MTBPQ96DY7 904 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 GPR78Q96P69 363 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 PAFAH2Q99487 392 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 DHRS9Q9BPW9 319 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 FAIM2Q9BWQ8 316 aa11.33□□□□□ -0.6
RABGGTA-213ENST00000560127 C12orf65Q9H3J6 166 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms