RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 PDGFAP04085 211 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 CCL3P10147 92 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 FUT4P22083 530 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 DCTP40126 519 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 CASP3P42574 277 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 RFX3P48380 749 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 ERFP50548 548 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 HLCSP50747 726 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 SSR4P51571 173 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 ACTR3P61158 418 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 AP2B1P63010 937 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 RAPSNQ13702 412 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 TUBA3CQ13748 450 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 ELOAQ14241 798 aaKnown RBP8.59□□□□□ -1.03
HERC1-206ENST00000559996 GNA13Q14344 377 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 FGFBP1Q14512 234 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 TBR1Q16650 682 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 LINC00303Q3SY05 128 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 FLYWCH1Q4VC44 716 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 CYBRD1Q53TN4 286 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 PDZK1Q5T2W1 519 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
HERC1-206ENST00000559996 BICRALQ6AI39 1079 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 TUBA3EQ6PEY2 450 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 DHRS4L2Q6PKH6 230 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 ENPP6Q6UWR7 440 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 ZNF836Q6ZNA1 936 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 VTCN1Q7Z7D3 282 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 PATL1Q86TB9 770 aaKnown RBP8.59□□□□□ -1.03
HERC1-206ENST00000559996 TSPYL5Q86VY4 417 aaPredicted RBP8.59□□□□□ -1.03
HERC1-206ENST00000559996 LACC1Q8IV20 430 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 AQP12AQ8IXF9 295 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 ADGRG5Q8IZF4 528 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 TAGAPQ8N103 731 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 SLC5A8Q8N695 610 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 SMYD1Q8NB12 490 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 TNIP2Q8NFZ5 429 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 OR52P1PQ8NH57 321 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 SLC22A8Q8TCC7 542 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 PAQR8Q8TEZ7 354 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 ZCCHC14Q8WYQ9 949 aaKnown RBP8.59□□□□□ -1.03
HERC1-206ENST00000559996 TTC9Q92623 222 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 HAS2Q92819 552 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 C7orf34Q96L11 122 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 SIGLEC12Q96PQ1 595 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 UBQLN4Q9NRR5 601 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 RLIMQ9NVW2 624 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 ANKRD10Q9NXR5 420 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 ANGPT4Q9Y264 503 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 DTNAQ9Y4J8 743 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 MGAQ8IWI9 3026 aa8.59□□□□□ -1.03
HERC1-206ENST00000559996 TNRC6AQ8NDV7 1962 aaKnown RBP8.59□□□□□ -1.03
HERC1-206ENST00000559996 NINQ8N4C6 2090 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 HEATR5AQ86XA9 2040 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 A0A1W2PQD3 144 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 C5orf58C9J3I9 102 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 CDK2AP1O14519 115 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 GSTA4O15217 222 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 FESP07332 822 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 C8BP07358 591 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 THBS1P07996 1170 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 NID1P14543 1247 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 TNFRSF1BP20333 461 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 ACAA2P42765 397 aaKnown RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 CD97P48960 835 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 ZNF136P52737 540 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 NRG3P56975 720 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 ELF3P78545 371 aaPredicted RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 RHDQ02161 417 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 MFAP5Q13361 173 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 FLOT2Q14254 428 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 INPP5JQ15735 1006 aaPredicted RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 NPTX1Q15818 432 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 NRF1Q16656 503 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 INTS11Q5TA45 600 aaKnown RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 AGAP7PQ5VUJ5 663 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 SPINK14Q6IE38 97 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 OPN5Q6U736 354 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 ISLR2Q6UXK2 745 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 LINC00696Q6ZRV3 163 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 MARCH3Q86UD3 253 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 LSRQ86X29 649 aaPredicted RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 RBM45Q8IUH3 476 aaKnown RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 GRAMD2AQ8IUY3 354 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 PAPD5Q8NDF8 572 aaKnown RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 MDS2Q8NDY4 140 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 CATSPER1Q8NEC5 780 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 FAM71CQ8NEG0 241 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 BHLHE22Q8NFJ8 381 aaPredicted RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 OR5M3Q8NGP4 307 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 CANT1Q8WVQ1 401 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 PYURFQ96I23 114 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 NSMCE2Q96MF7 247 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 AGAP4Q96P64 663 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 RAB3IPQ96QF0 476 aaPredicted RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 ZNF607Q96SK3 696 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 ARHGDIGQ99819 225 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 DOHHQ9BU89 302 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 ANGPTL4Q9BY76 406 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms