RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 GPAT3Q53EU6 434 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 FBLN7Q53RD9 439 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 CT45A2Q5DJT8 189 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 C1orf146Q5VVC0 180 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 TCTN3Q6NUS6 607 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 HSDL2Q6YN16 418 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 FRRS1Q6ZNA5 592 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 NDUFAF7Q7L592 441 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 C16orf62Q7Z3J2 963 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 ARPINQ7Z6K5 226 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 VTCN1Q7Z7D3 282 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 ZNF605Q86T29 641 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 SERPINA11Q86U17 422 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 VRK2Q86Y07 508 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 LURAP1LQ8IV03 231 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 NATD1Q8N6N6 113 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 ZNF614Q8N883 585 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 BCORP1Q8N888 145 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 GATSQ8NAP1 163 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 SMYD1Q8NB12 490 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 MORN4Q8NDC4 146 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 OR7G1Q8NGA0 311 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 OR1N1Q8NGS0 311 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 ELP5Q8TE02 316 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 ADAMTS15Q8TE58 950 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 SLC38A5Q8WUX1 472 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 KCNE4Q8WWG9 221 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 DAZLQ92904 295 aaKnown RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 NACC2Q96BF6 587 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 TAMM41Q96BW9 452 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 ZG16BQ96DA0 208 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 OMA1Q96E52 524 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 VMP1Q96GC9 406 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 REXO5Q96IC2 774 aaKnown RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 DHRS1Q96LJ7 313 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 BTBD9Q96Q07 612 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 PELOQ9BRX2 385 aaKnown RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 GPR87Q9BY21 358 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 RTN4RQ9BZR6 473 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 SEMA4CQ9C0C4 833 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 DENND2DQ9H6A0 471 aaPredicted RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 CPNE5Q9HCH3 593 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 A4GALTQ9NPC4 353 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 NDE1Q9NXR1 346 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 P2RX2Q9UBL9 471 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 SUCOQ9UBS9 1254 aaKnown RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 COPS7AQ9UBW8 275 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 C19orf25Q9UFG5 118 aaPredicted RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 KCNE5Q9UJ90 142 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 POMPQ9Y244 141 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 GPR55Q9Y2T6 319 aaPredicted RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 PCDHGA6Q9Y5G7 932 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 A0A0G2JMM0 328 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 A0A1W2PPB8 328 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 A0A1W2PRS3 328 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PRAMEF25A6NGN4 478 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 FRG2CA6NGY1 282 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 KIR3DP1A8MWS1 328 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 B4DXG7 233 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 C5orf58C9J3I9 102 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 M0R3H8 397 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 TAF4O00268 1085 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ETV2O00321 342 aaPredicted RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 KIAA0513O60268 411 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 TPST1O60507 370 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ICOSLGO75144 302 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 UGT2B11O75310 529 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ENTPD5O75356 428 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 CIB2O75838 187 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 OR6B1O95007 311 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 DIRAS1O95057 198 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PGM3O95394 542 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 UTS2O95399 124 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ZNF682O95780 498 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 NPPAP01160 153 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 IMPDH2P12268 514 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 CYP4B1P13584 511 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 HSD17B1P14061 328 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PTNP21246 168 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PPIBP23284 216 aaKnown RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 ITGA3P26006 1051 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ABCD3P28288 659 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 HTR1EP28566 365 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 GALNSP34059 522 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PIGAP37287 484 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 SOX3P41225 446 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 KIR2DL2P43627 348 aaPredicted RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 RASSF2P50749 326 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 CLCN2P51788 898 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 FBXW4P57775 412 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 POU6F2P78424 691 aaPredicted RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 ELF3P78545 371 aaPredicted RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 HPCAP84074 193 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 DMTNQ08495 405 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PLCXD2Q0VAA5 305 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 FOXD4Q12950 439 aaPredicted RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 FADDQ13158 208 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 FLOT2Q14254 428 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 MYBPC3Q14896 1274 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 GPR68Q15743 365 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms