RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 IDUAP35475 653 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 SLC6A8P48029 635 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 ZNF41P51814 821 aaPredicted RBP8.21□□□□□ -1.1
HDDC3-204ENST00000559834 CARD18P57730 90 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 RPS4XP62701 263 aaKnown RBP8.21□□□□□ -1.1
HDDC3-204ENST00000559834 SLC29A2Q14542 456 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 ETFDHQ16134 617 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 WHAMMP3Q1A5X7 153 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 PRSS53Q2L4Q9 553 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 GRAMD1BQ3KR37 738 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 GLE1Q53GS7 698 aaKnown RBP8.21□□□□□ -1.1
HDDC3-204ENST00000559834 HBMQ6B0K9 141 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 NOXRED1Q6NXP6 359 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 TRIM46Q7Z4K8 759 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 GGNQ86UU5 652 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 WFDC8Q8IUA0 241 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 MISPQ8IVT2 679 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 HOMEZQ8IX15 550 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 GTPBP8Q8N3Z3 284 aaPredicted RBP8.21□□□□□ -1.1
HDDC3-204ENST00000559834 CCNYL1Q8N7R7 359 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 CDRT4Q8N9R6 151 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 MNS1Q8NEH6 495 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 ZFP28Q8NHY6 868 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 IGFBPL1Q8WX77 278 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 OSTF1Q92882 214 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 USB1Q9BQ65 265 aaKnown RBP8.21□□□□□ -1.1
HDDC3-204ENST00000559834 TACO1Q9BSH4 297 aaKnown RBP8.21□□□□□ -1.1
HDDC3-204ENST00000559834 ACTR6Q9GZN1 396 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 CLEC4AQ9UMR7 237 aa8.21□□□□□ -1.1
HDDC3-204ENST00000559834 POLR3HQ9Y535 204 aaPredicted RBP8.21□□□□□ -1.1
HDDC3-204ENST00000559834 ROS1P08922 2347 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 USF3Q68DE3 2245 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 GXYLT2A0PJZ3 443 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 C7orf72A4D263 438 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 CXCL13O43927 109 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 SEC22BO75396 215 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 CRLF1O75462 422 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 NKX2-2O95096 273 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 HSPA4LO95757 839 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 PLAUP00749 431 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 TP53P04637 393 aaPredicted RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 DDX5P17844 614 aaKnown RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 EIF1P41567 113 aaKnown RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 SERPINB4P48594 390 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 PRKAG1P54619 331 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 MANFP55145 182 aaKnown RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 HSPB3Q12988 150 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 TNK1Q13470 666 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 RNPS1Q15287 305 aaKnown RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 CTU2Q2VPK5 515 aaKnown RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 CFAP157Q5JU67 520 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 TMEM201Q5SNT2 666 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 FAM219BQ5XKK7 198 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 ADAM5Q6NVV9 412 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 ZCCHC12Q6PEW1 402 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 APOOLQ6UXV4 268 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 TRMT10CQ7L0Y3 403 aaKnown RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 CXXC5Q7LFL8 322 aaKnown RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 ZNF551Q7Z340 670 aaPredicted RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 TRABD2AQ86V40 505 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 OR6Y1Q8NGX8 325 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 OR4C3Q8NH37 302 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 OR2V1Q8NHB1 315 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 HSD17B8Q92506 261 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 PIK3R3Q92569 461 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 SLC9A6Q92581 669 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 AKAP1Q92667 903 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 HOXB13Q92826 284 aaPredicted RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 ZBED6CLQ96FA7 236 aaPredicted RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 ADGRG7Q96K78 797 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 KCNA7Q96RP8 456 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 TMEM204Q9BSN7 226 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 GSTO2Q9H4Y5 243 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 ESRP2Q9H6T0 727 aaKnown RBP8.2□□□□□ -1.1
HDDC3-204ENST00000559834 EQTNQ9NQ60 294 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 UBQLN4Q9NRR5 601 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 LAMP3Q9UQV4 416 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 HEATR5AQ86XA9 2040 aa8.2□□□□□ -1.1
HDDC3-204ENST00000559834 PCNX3Q9H6A9 2034 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 HRNRQ86YZ3 2850 aaPredicted RBP8.19□□□□□ -1.1
HDDC3-204ENST00000559834 A0A0J9YW62 118 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 A0A1W2PRB8 838 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 GJE1A6NN92 205 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 SHISA8B8ZZ34 492 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 GOLGA8RI6L899 631 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 SLC28A1O00337 649 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 SCDO00767 359 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 UBFD1O14562 309 aaKnown RBP8.19□□□□□ -1.1
HDDC3-204ENST00000559834 TNFSF11O14788 317 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 PDPK1O15530 556 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 OXSR1O95747 527 aaPredicted RBP8.19□□□□□ -1.1
HDDC3-204ENST00000559834 IGKV1D-16P01601 117 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 OPN1LWP04000 364 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 CD3EP07766 207 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 ABHD2P08910 425 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 ALOX5P09917 674 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 UROSP10746 265 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 MYL2P10916 166 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 IL32P24001 234 aa8.19□□□□□ -1.1
HDDC3-204ENST00000559834 MAP3K8P41279 467 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms