RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 GLRX2Q9NS18 164 aa7.9□□□□□ -1.14
SNRPA1-208ENST00000559686 STOML1Q9UBI4 398 aa7.9□□□□□ -1.14
SNRPA1-208ENST00000559686 CADP27708 2225 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 IGHV3-15A0A0B4J1V0 119 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 NPIPA5A0A0B4J1W7 369 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 TMEM89A2RUT3 159 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 ZNF814B7Z6K7 855 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 FAM157AC9JC47 383 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 NPIPA7E9PJI5 369 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 SMAD9O15198 467 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 FADS1O60427 444 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 IL33O95760 270 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 ATP1B1P05026 303 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 NPIPA8P0DM63 369 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 ZNF23P17027 643 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 APEX1P27695 318 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 COMPP49747 757 aaPredicted RBP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 MAPK12P53778 367 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 CHRNB3Q05901 458 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 LGALS3BPQ08380 585 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 ZNF155Q12901 538 aaPredicted RBP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 CUL3Q13618 768 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 E2F2Q14209 437 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 ERCC6LQ2NKX8 1250 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 AWAT1Q58HT5 328 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 RNASEH2BQ5TBB1 312 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 GTF2IRD2BQ6EKJ0 949 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 SLC48A1Q6P1K1 146 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 CCDC137Q6PK04 289 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 GTF2IRD2Q86UP8 949 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 GATSQ8NAP1 163 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 PLPP7Q8NBV4 271 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 OR9A2Q8NGT5 310 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 RNF138Q8WVD3 245 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 CNRIP1Q96F85 164 aaPredicted RBP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 REXO5Q96IC2 774 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 RADILQ96JH8 1075 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 ADGRG7Q96K78 797 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 RNF145Q96MT1 663 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 SORCS2Q96PQ0 1159 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 VRK1Q99986 396 aaPredicted RBP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 NAT9Q9BTE0 207 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 LRRC1Q9BTT6 524 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 YY1AP1Q9H869 796 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 CES1P1Q9UKY3 287 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 MTO1Q9Y2Z2 717 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 RNF11Q9Y3C5 154 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 PCDHA9Q9Y5H5 950 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 FKBP7Q9Y680 259 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 ZNF780BQ9Y6R6 833 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 PMF1-BGLAPU3KQ54 211 aa7.89□□□□□ -1.15
SNRPA1-208ENST00000559686 C1orf226A1L170 272 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 ESRRBO95718 433 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 DHRS4L1P0CG22 281 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 CTAGE8P0CG41 777 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 ME2P23368 584 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 EDNRAP25101 427 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 SHC1P29353 583 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 CLK3P49761 638 aaKnown RBP7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 ARFIP1P53367 373 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 GYS2P54840 703 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 CARD18P57730 90 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 MRPS22P82650 360 aaKnown RBP7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 MGAT5Q09328 741 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 CCNIQ14094 377 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 MLC1Q15049 377 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 TMEM44Q2T9K0 475 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 SGO1Q5FBB7 561 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 CDKL4Q5MAI5 379 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 CTAGE4Q8IX94 777 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 RNF10Q8N5U6 811 aaKnown RBP7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 CDYL2Q8N8U2 506 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 ZNF418Q8TF45 676 aaPredicted RBP7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 MS4A14Q96JA4 679 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 VSTM2LQ96N03 204 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 SNX18Q96RF0 628 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 SRXN1Q9BYN0 137 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 TBL1XR1Q9BZK7 514 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 TSPY26PQ9H489 355 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 ANKZF1Q9H8Y5 726 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 PAQR5Q9NXK6 330 aaPredicted RBP7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 NUDT4Q9NZJ9 180 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 KLHL13Q9P2N7 655 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 TRAF6Q9Y4K3 522 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 CMYA5Q8N3K9 4069 aa7.88□□□□□ -1.15
SNRPA1-208ENST00000559686 LOC390937A0A1W2PQ73 354 aa7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 NDUFS8O00217 210 aa7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 RAD51DO75771 328 aa7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 WISP3O95389 354 aaPredicted RBP7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 SLU7O95391 586 aaKnown RBP7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 ANGPTL1O95841 491 aa7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 IGHV3-9P01782 118 aa7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 BMP4P12644 408 aa7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 GGT1P19440 569 aa7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 IGHV1-2P23083 117 aa7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 CD40P25942 277 aa7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 ATP6V0D1P61421 351 aa7.87□□□□□ -1.15
SNRPA1-208ENST00000559686 POU4F1Q01851 419 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms