RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SLC22A16Q86VW1 577 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 PTOV1Q86YD1 416 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 SIAH3Q8IW03 269 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 TMEM251Q8N6I4 163 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 METTL25Q8N6Q8 603 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 WDSUB1Q8N9V3 476 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 CPT1CQ8TCG5 803 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 FAR1Q8WVX9 515 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 TREX2Q9BQ50 279 aaPredicted RBP19.79■□□□□ 0.76
SNX1-206ENST00000559389 AGPAT4Q9NRZ5 378 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 OLAHQ9NV23 265 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 PPP4R1LQ9P1A2 415 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 C15orf41Q9Y2V0 281 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 DTNAQ9Y4J8 743 aa19.79■□□□□ 0.76
SNX1-206ENST00000559389 B4DXG7 233 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 GNB5O14775 395 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 TFECO14948 347 aaPredicted RBP19.78■□□□□ 0.76
SNX1-206ENST00000559389 RPS4Y1P22090 263 aaKnown RBP19.78■□□□□ 0.76
SNX1-206ENST00000559389 MST1P26927 711 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 GZMMP51124 257 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 RBBP4Q09028 425 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 ZNF630Q2M218 657 aaPredicted RBP19.78■□□□□ 0.76
SNX1-206ENST00000559389 PDZK1Q5T2W1 519 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 TRPM8Q7Z2W7 1104 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 PRICKLE2Q7Z3G6 844 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 CALHM3Q86XJ0 350 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 PLCZ1Q86YW0 608 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 ZZZ3Q8IYH5 903 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 FAM109AQ8N4B1 249 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 GATSQ8NAP1 163 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 OR1J4Q8NGS1 313 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 OR10A6Q8NH74 314 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 NFKBIDQ8NI38 313 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 HOPXQ9BPY8 73 aaPredicted RBP19.78■□□□□ 0.76
SNX1-206ENST00000559389 SLX1AQ9BQ83 275 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 SPATA9Q9BWV2 254 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 QRSL1Q9H0R6 528 aaKnown RBP19.78■□□□□ 0.76
SNX1-206ENST00000559389 UBQLN3Q9H347 655 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 BCL2L10Q9HD36 194 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 SDHAF3Q9NRP4 125 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 SUCOQ9UBS9 1254 aaKnown RBP19.78■□□□□ 0.76
SNX1-206ENST00000559389 B4GALT7Q9UBV7 327 aa19.78■□□□□ 0.76
SNX1-206ENST00000559389 IGLV3-32A0A0A0MS00 114 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 AGAP5A6NIR3 686 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 NDUFB5O43674 189 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 RFPL3SP0C7P2 107 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 TDGF1P3P51864 188 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 PPIAP62937 165 aaKnown RBP19.77■□□□□ 0.76
SNX1-206ENST00000559389 CDK6Q00534 326 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 C17orf67Q0P5P2 114 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 MAPK14Q16539 360 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 MISPQ8IVT2 679 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 ZNF614Q8N883 585 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 FADS6Q8N9I5 356 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 C11orf65Q8NCR3 313 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 BBS10Q8TAM1 723 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 PMM1Q92871 262 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 ZDHHC11Q9H8X9 412 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 HHATLQ9HCP6 504 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 CMTM6Q9NX76 183 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 QPCTLQ9NXS2 382 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 BOD1L1Q8NFC6 3051 aa19.77■□□□□ 0.76
SNX1-206ENST00000559389 BSNQ9UPA5 3926 aa19.77■□□□□ 0.75
SNX1-206ENST00000559389 SPTA1P02549 2419 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 SERINC4A6NH21 518 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 C5orf58C9J3I9 102 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 PGM3O95394 542 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 PCGF2P35227 344 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 MAGEA5P43359 124 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 SLC7A2P52569 658 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 SCARB2Q14108 478 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 CMPK2Q5EBM0 449 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 BNC2Q6ZN30 1099 aaPredicted RBP19.76■□□□□ 0.75
SNX1-206ENST00000559389 HMGN2P46Q86SG4 172 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 SLC15A3Q8IY34 581 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 ZG16BQ96DA0 208 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 GNRHR2Q96P88 292 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 ECSITQ9BQ95 431 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 TSPAN10Q9H1Z9 355 aaPredicted RBP19.76■□□□□ 0.75
SNX1-206ENST00000559389 MTHFD2LQ9H903 347 aaPredicted RBP19.76■□□□□ 0.75
SNX1-206ENST00000559389 ABCD2Q9UBJ2 740 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 FBXL2Q9UKC9 423 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 ANGPT4Q9Y264 503 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 AP3M1Q9Y2T2 418 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 L3MBTL1Q9Y468 752 aa19.76■□□□□ 0.75
SNX1-206ENST00000559389 A0A0G2JPF8 293 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 FAM220BPB1ANY3 271 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 HNRNPCL2B2RXH8 293 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 HNRNPCL3B7ZW38 293 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 H3BNH8 94 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 HNRNPCL1O60812 293 aaKnown RBP19.75■□□□□ 0.75
SNX1-206ENST00000559389 HNRNPCL4P0DMR1 293 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 ESRRAP11474 423 aaPredicted RBP19.75■□□□□ 0.75
SNX1-206ENST00000559389 GDF1P27539 372 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 RNF144AP50876 292 aaPredicted RBP19.75■□□□□ 0.75
SNX1-206ENST00000559389 PSME3P61289 254 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 TLE1Q04724 770 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 C19orf57Q0VDD7 668 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 FGFBP1Q14512 234 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 OR5M10Q6IEU7 315 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms