RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 TMEM156Q8N614 296 aa16.6■□□□□ 0.25
CLPX-203ENST00000558958 PAPD5Q8NDF8 572 aaKnown RBP16.6■□□□□ 0.25
CLPX-203ENST00000558958 OR5M3Q8NGP4 307 aa16.6■□□□□ 0.25
CLPX-203ENST00000558958 APOBEC4Q8WW27 367 aaKnown RBP16.6■□□□□ 0.25
CLPX-203ENST00000558958 PROX1Q92786 737 aa16.6■□□□□ 0.25
CLPX-203ENST00000558958 STMN2Q93045 179 aa16.6■□□□□ 0.25
CLPX-203ENST00000558958 TMCO6Q96DC7 493 aa16.6■□□□□ 0.25
CLPX-203ENST00000558958 SLC47A1Q96FL8 570 aa16.6■□□□□ 0.25
CLPX-203ENST00000558958 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.6■□□□□ 0.25
CLPX-203ENST00000558958 STMN3Q9NZ72 180 aa16.6■□□□□ 0.25
CLPX-203ENST00000558958 AURKCQ9UQB9 309 aa16.6■□□□□ 0.25
CLPX-203ENST00000558958 RAXQ9Y2V3 346 aa16.6■□□□□ 0.25
CLPX-203ENST00000558958 KCNMB2Q9Y691 235 aa16.6■□□□□ 0.25
CLPX-203ENST00000558958 SERINC4A6NH21 518 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 A6NL46 340 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 C1QTNF9BB2RNN3 333 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 ALG1L2C9J202 215 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 FKBP6O75344 327 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 C1QTNF9P0C862 333 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 RAP2AP10114 183 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 HPGDP15428 266 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 HOXB6P17509 224 aaKnown RBP16.59■□□□□ 0.25
CLPX-203ENST00000558958 EVI2BP34910 448 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 ST13P50502 369 aaKnown RBP16.59■□□□□ 0.25
CLPX-203ENST00000558958 IFI44LQ53G44 452 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 EIPR1Q53HC9 387 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 MRPL2Q5T653 305 aaKnown RBP16.59■□□□□ 0.25
CLPX-203ENST00000558958 ZNF468Q5VIY5 522 aaPredicted RBP16.59■□□□□ 0.25
CLPX-203ENST00000558958 ABHD17BQ5VST6 288 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 AAGABQ6PD74 315 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 IL20RBQ6UXL0 311 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 BEST3Q8N1M1 668 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 ZNF614Q8N883 585 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 POGLUT1Q8NBL1 392 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 OR10G3Q8NGC4 313 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 RNF138Q8WVD3 245 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 GEMIN6Q8WXD5 167 aaKnown RBP16.59■□□□□ 0.25
CLPX-203ENST00000558958 NODALQ96S42 347 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 S100A14Q9HCY8 104 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 ARMC1Q9NVT9 282 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 RLIMQ9NVW2 624 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 SH3GLB1Q9Y371 365 aa16.59■□□□□ 0.25
CLPX-203ENST00000558958 EXPH5Q8NEV8 1989 aa16.58■□□□□ 0.25
CLPX-203ENST00000558958 A0A1W2PQD3 144 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 CDHR4A6H8M9 788 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 PRAMEF25A6NGN4 478 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 H3BNX3 289 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 MGRN1O60291 552 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 KRT36O76013 467 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 TNFRSF1BP20333 461 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 ADH7P40394 386 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 RNF144AP50876 292 aaPredicted RBP16.58■□□□□ 0.24
CLPX-203ENST00000558958 PLAURQ03405 335 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 FNDC7Q5VTL7 733 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 AGAP7PQ5VUJ5 663 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 BROXQ5VW32 411 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 UNQ6494/PRO21346Q6UXR6 183 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 ERMP1Q7Z2K6 904 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 CMIPQ8IY22 773 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 GRHL3Q8TE85 626 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 C7orf34Q96L11 122 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 AGAP4Q96P64 663 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 ARMC7Q9H6L4 198 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 HPF1Q9NWY4 346 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 GPR83Q9NYM4 423 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 ABCG2Q9UNQ0 655 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 AP4S1Q9Y587 144 aa16.58■□□□□ 0.24
CLPX-203ENST00000558958 CHCHD2Q9Y6H1 151 aaPredicted RBP16.58■□□□□ 0.24
CLPX-203ENST00000558958 LAMA5O15230 3695 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 TP53I11O14683 189 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 MAGEA2P43356 314 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 OR1E2P47887 323 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 HLCSP50747 726 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 CCL11P51671 97 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 KCNC4Q03721 635 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 RAPSNQ13702 412 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 NRF1Q16656 503 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 ZSWIM7Q19AV6 140 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 TBCELQ5QJ74 424 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 LRRC69Q6ZNQ3 347 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 GRAMD2AQ8IUY3 354 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 GPALPP1Q8IXQ4 340 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 SGCZQ96LD1 299 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 SECISBP2Q96T21 854 aaKnown RBP16.57■□□□□ 0.24
CLPX-203ENST00000558958 ARHGDIGQ99819 225 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 WFDC6Q9BQY6 131 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 CHID1Q9BWS9 393 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 TBL1XR1Q9BZK7 514 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 RTN4RQ9BZR6 473 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 ZNF552Q9H707 407 aaPredicted RBP16.57■□□□□ 0.24
CLPX-203ENST00000558958 SH2D2AQ9NP31 389 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 IL1RAPQ9NPH3 570 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 KLHL28Q9NXS3 571 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 ABI3Q9P2A4 366 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 SLC13A4Q9UKG4 626 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 SLC35A3Q9Y2D2 325 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 SLC9A8Q9Y2E8 581 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 IGF2RP11717 2491 aa16.57■□□□□ 0.24
CLPX-203ENST00000558958 K7ENP7 123 aa16.56■□□□□ 0.24
CLPX-203ENST00000558958 CDK2AP1O14519 115 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms