RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 DAZAP2Q15038 168 aaPredicted RBP15.34■□□□□ 0.05
LRRC28-210ENST00000558879 SMU1Q2TAY7 513 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 CDC73Q6P1J9 531 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 FIGNL1Q6PIW4 674 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 UBQLNLQ8IYU4 475 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 MEIOBQ8N635 442 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 METTL25Q8N6Q8 603 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 ZNF781Q8N8C0 355 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 COX18Q8N8Q8 333 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 OR5M1Q8NGP8 315 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 NUDT8Q8WV74 236 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 OR5P2Q8WZ92 322 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 TUBGCP3Q96CW5 907 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 OTUB1Q96FW1 271 aaPredicted RBP15.34■□□□□ 0.05
LRRC28-210ENST00000558879 SORT1Q99523 831 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 C20orf27Q9GZN8 174 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 PIGMQ9H3S5 423 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 PIGUQ9H490 435 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 HHATLQ9HCP6 504 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 FBXO34Q9NWN3 711 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 GALNT8Q9NY28 637 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 HAO1Q9UJM8 370 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 FREM1Q5H8C1 2179 aa15.34■□□□□ 0.05
LRRC28-210ENST00000558879 C7orf72A4D263 438 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 H0YC42 278 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 H3BML4 177 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 NDUFB5O43674 189 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 TNFRSF21O75509 655 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 GOSR1O95249 250 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 G6PDP11413 515 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 PRPS1L1P21108 318 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 TPD52P55327 224 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-210ENST00000558879 CLDN20P56880 219 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 EEF1A1P68104 462 aaKnown RBP15.33■□□□□ 0.04
LRRC28-210ENST00000558879 POU6F2P78424 691 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-210ENST00000558879 MAD2L1Q13257 205 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-210ENST00000558879 CHI3L2Q15782 390 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 CCNJQ5T5M9 372 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 CPTPQ5TA50 214 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 EEF1A1P5Q5VTE0 462 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 GGNQ86UU5 652 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 KRTCAP2Q8N6L1 136 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 OR56A1Q8NGH5 318 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 SFXN5Q8TD22 340 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 FIG4Q92562 907 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 NINJ1Q92982 152 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 YIPF4Q9BSR8 244 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 RBM24Q9BX46 236 aaKnown RBP15.33■□□□□ 0.04
LRRC28-210ENST00000558879 BTBD2Q9BX70 525 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 POLDIP3Q9BY77 421 aaKnown RBP15.33■□□□□ 0.04
LRRC28-210ENST00000558879 BHLHE41Q9C0J9 482 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-210ENST00000558879 CLEC4MQ9H2X3 399 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-210ENST00000558879 ZNF395Q9H8N7 513 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-210ENST00000558879 GPATCH2Q9NW75 528 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 NOP53Q9NZM5 478 aaKnown RBP15.33■□□□□ 0.04
LRRC28-210ENST00000558879 PACSIN3Q9UKS6 424 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 ZNF175Q9Y473 711 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 ACTL7BQ9Y614 415 aa15.33■□□□□ 0.04
LRRC28-210ENST00000558879 TUBAL3A6NHL2 446 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 SLC22A20A6NK97 555 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 SEC14L5O43304 696 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 SNUPNO95149 360 aaKnown RBP15.32■□□□□ 0.04
LRRC28-210ENST00000558879 C6orf47O95873 294 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 EPXP11678 715 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 PSMA4P25789 261 aaKnown RBP15.32■□□□□ 0.04
LRRC28-210ENST00000558879 CCT3P49368 545 aaKnown RBP15.32■□□□□ 0.04
LRRC28-210ENST00000558879 PCYT1AP49585 367 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 CLDN8P56748 225 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 EEFSECP57772 596 aaKnown RBP15.32■□□□□ 0.04
LRRC28-210ENST00000558879 ABCE1P61221 599 aaKnown RBP15.32■□□□□ 0.04
LRRC28-210ENST00000558879 EMX2Q04743 252 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 GUSBP1Q15486 140 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 CD226Q15762 336 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 PDCD2Q16342 344 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-210ENST00000558879 PLPPR5Q32ZL2 321 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 OR2A2Q6IF42 318 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 LUZP2Q86TE4 346 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 MISPQ8IVT2 679 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 PPP1R14CQ8TAE6 165 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 JADE3Q92613 823 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 CDS1Q92903 461 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 NPAS1Q99742 590 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 DUSP26Q9BV47 211 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 PINK1Q9BXM7 581 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 ACTRT3Q9BYD9 372 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 RNF122Q9H9V4 155 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 UBQLN4Q9NRR5 601 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 VDAC3Q9Y277 283 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 RAP2CQ9Y3L5 183 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 AP4B1Q9Y6B7 739 aa15.32■□□□□ 0.04
LRRC28-210ENST00000558879 ZNF469Q96JG9 3925 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-210ENST00000558879 A0A087WZY1 265 aa15.31■□□□□ 0.04
LRRC28-210ENST00000558879 A8MXE2 369 aa15.31■□□□□ 0.04
LRRC28-210ENST00000558879 SHISA8B8ZZ34 492 aa15.31■□□□□ 0.04
LRRC28-210ENST00000558879 MSTNO14793 375 aa15.31■□□□□ 0.04
LRRC28-210ENST00000558879 TP53BP2Q13625 1128 aa15.31■□□□□ 0.04
LRRC28-210ENST00000558879 MPP2Q14168 576 aa15.31■□□□□ 0.04
LRRC28-210ENST00000558879 LSM12Q3MHD2 195 aaKnown RBP15.31■□□□□ 0.04
LRRC28-210ENST00000558879 VWA1Q6PCB0 445 aa15.31■□□□□ 0.04
LRRC28-210ENST00000558879 P4HA3Q7Z4N8 544 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms