RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ZNF845Q96IR2 970 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-208ENST00000558827 SH3GL2Q99962 352 aa11.31□□□□□ -0.6
SMAD3-208ENST00000558827 TMEM185BQ9H7F4 350 aa11.31□□□□□ -0.6
SMAD3-208ENST00000558827 PTGES2Q9H7Z7 377 aa11.31□□□□□ -0.6
SMAD3-208ENST00000558827 ABCG2Q9UNQ0 655 aa11.31□□□□□ -0.6
SMAD3-208ENST00000558827 RAP2CQ9Y3L5 183 aa11.31□□□□□ -0.6
SMAD3-208ENST00000558827 CSMD2Q7Z408 3487 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 OTOGQ6ZRI0 2925 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 GOLGA8QA0A0J9YX86 632 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 GOLGA8OA6NCC3 632 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 GOLGA8NF8WBI6 632 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 TM9SF1O15321 606 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 BIRC5O15392 142 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 MYZAPP0CAP1 466 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 PEPDP12955 493 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 HPGDP15428 266 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 CHMP24386 653 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 RPL3P39023 403 aaKnown RBP11.3□□□□□ -0.6
SMAD3-208ENST00000558827 CLDN8P56748 225 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 HBA1P69905 142 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 PSPHP78330 225 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 PRR5P85299 388 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 EMX2Q04743 252 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 C17orf67Q0P5P2 114 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 CD226Q15762 336 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 TNFAIP8L3Q5GJ75 292 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 CDC73Q6P1J9 531 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 CDH24Q86UP0 819 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 RIMKLAQ8IXN7 391 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 ZNF614Q8N883 585 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 CNEP1R1Q8N9A8 125 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 FAM110BQ8TC76 370 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 ADAMTS15Q8TE58 950 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 HOXB13Q92826 284 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-208ENST00000558827 PRPF18Q99633 342 aaKnown RBP11.3□□□□□ -0.6
SMAD3-208ENST00000558827 GPATCH1Q9BRR8 931 aaKnown RBP11.3□□□□□ -0.6
SMAD3-208ENST00000558827 PINK1Q9BXM7 581 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 LIME1Q9H400 295 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 DNAJB12Q9NXW2 375 aaKnown RBP11.3□□□□□ -0.6
SMAD3-208ENST00000558827 NTMQ9P121 344 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 CLCF1Q9UBD9 225 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 ZNF629Q9UEG4 869 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-208ENST00000558827 MARCOQ9UEW3 520 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-208ENST00000558827 KCNN3Q9UGI6 736 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 FAF1Q9UNN5 650 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-208ENST00000558827 AKAP9Q99996 3911 aa11.3□□□□□ -0.6
SMAD3-208ENST00000558827 TMEM120BA0PK00 339 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 TTC36A6NLP5 189 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 SMNDC1O75940 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMAD3-208ENST00000558827 RCBTB2O95199 551 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 C1QCP02747 245 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 PRPS1L1P21108 318 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 OPRM1P35372 400 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 CPA2P48052 419 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
SMAD3-208ENST00000558827 PHC1P78364 1004 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 POU4F3Q15319 338 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 LSM12Q3MHD2 195 aaKnown RBP11.29□□□□□ -0.6
SMAD3-208ENST00000558827 HMGN2P46Q86SG4 172 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 MEIOBQ8N635 442 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 ATP6V1C2Q8NEY4 427 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 OR4A15Q8NGL6 344 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 RFWD2Q8NHY2 731 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 PHOSPHO1Q8TCT1 267 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 WNT2BQ93097 391 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 OR7D2Q96RA2 312 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 TM9SF2Q99805 663 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 RBM24Q9BX46 236 aaKnown RBP11.29□□□□□ -0.6
SMAD3-208ENST00000558827 BTBD2Q9BX70 525 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 ACTRT3Q9BYD9 372 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 DPY30Q9C005 99 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 PIGUQ9H490 435 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 SSU72Q9NP77 194 aaKnown RBP11.29□□□□□ -0.6
SMAD3-208ENST00000558827 ATAD3AQ9NVI7 634 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 GPATCH2Q9NW75 528 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
SMAD3-208ENST00000558827 CLEC4AQ9UMR7 237 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 MRPS18CQ9Y3D5 142 aaKnown RBP11.29□□□□□ -0.6
SMAD3-208ENST00000558827 F8P00451 2351 aa11.29□□□□□ -0.6
SMAD3-208ENST00000558827 SLC22A20A6NK97 555 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 ALG1L2C9J202 215 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 SCDO00767 359 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 EIF1AYO14602 144 aaKnown RBP11.28□□□□□ -0.6
SMAD3-208ENST00000558827 HCRTR2O43614 444 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 IFI6P09912 130 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 DDX5P17844 614 aaKnown RBP11.28□□□□□ -0.6
SMAD3-208ENST00000558827 IL11P20809 199 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 ATP6V1C1P21283 382 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 TBXA2RP21731 343 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 CPOXP36551 454 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 MLC1Q15049 377 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 SGCBQ16585 318 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMAD3-208ENST00000558827 DCST2Q5T1A1 773 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 VWA1Q6PCB0 445 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 C6orf120Q7Z4R8 191 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 ADGRE4PQ86SQ3 457 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 WDR75Q8IWA0 830 aaKnown RBP11.28□□□□□ -0.6
SMAD3-208ENST00000558827 OR56A1Q8NGH5 318 aa11.28□□□□□ -0.6
SMAD3-208ENST00000558827 FNDC9Q8TBE3 224 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms