RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 CSKP41240 450 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 PSMA6P60900 246 aaKnown RBP4.75□□□□□ -1.65
HMG20A-204ENST00000558288 AP1S1P61966 158 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 B4GALNT1Q00973 533 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 GPR17Q13304 367 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 FGL2Q14314 439 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 SLBPQ14493 270 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMG20A-204ENST00000558288 UBXN2BQ14CS0 331 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 LPAL2Q16609 132 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 MPEG1Q2M385 716 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 NHLRC3Q5JS37 347 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 HECTD3Q5T447 861 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 RETSATQ6NUM9 610 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 ATRAIDQ6UW56 229 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 TFAP2EQ6VUC0 442 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 Q6ZTK2 550 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 BTN2A1Q7KYR7 527 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 LINGO2Q7L985 606 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 CAMKMTQ7Z624 323 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 CEACAM19Q7Z692 300 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 RTN4RL1Q86UN2 441 aaPredicted RBP4.75□□□□□ -1.65
HMG20A-204ENST00000558288 KRT78Q8N1N4 520 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 ARIH2OSQ8N7S6 290 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 CLRN3Q8NCR9 226 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 OR56B4Q8NH76 319 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 ZNF671Q8TAW3 534 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 UROC1Q96N76 676 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 GPA33Q99795 319 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 SEC22CQ9BRL7 303 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 REG4Q9BYZ8 158 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 SLC6A16Q9GZN6 736 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 TMEM168Q9H0V1 697 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 LRRN3Q9H3W5 708 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 WDR26Q9H7D7 661 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 SYNDIG1Q9H7V2 258 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 DDX31Q9H8H2 851 aaKnown RBP4.75□□□□□ -1.65
HMG20A-204ENST00000558288 BRF2Q9HAW0 419 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 ISYNA1Q9NPH2 558 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 NANSQ9NR45 359 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 C5AR2Q9P296 337 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 LIPT1Q9Y234 373 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 CSNK1G3Q9Y6M4 447 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 PLXNA4Q9HCM2 1894 aa4.75□□□□□ -1.65
HMG20A-204ENST00000558288 EPG5Q9HCE0 2579 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 CHD8Q9HCK8 2581 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 TRBV5-4A0A0C4DH59 114 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SYNDIG1LA6NDD5 238 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 FAM183AA6NL82 134 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 FAM170BA6NMN3 283 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 H0YIV9 168 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ARPC1BO15143 372 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SMAD6O43541 496 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 UGDHO60701 494 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ZNF623O75123 536 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SLC16A8O95907 504 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 KLKB1P03952 638 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 WNT1P04628 370 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 RPLP2P05387 115 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 NMBP08949 121 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ANKRD34CP0C6C1 535 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 DRD2P14416 443 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 CXCL2P19875 107 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 NPR2P20594 1047 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 NFYAP23511 347 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 RPL3P39023 403 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 PREPP48147 710 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 RFX3P48380 749 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 MTNR1BP49286 362 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 PRKAG1P54619 331 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 C21orf58P58505 322 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 TAS2R41P59536 307 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 GPR85P60893 370 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 PITPNAQ00169 270 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SCRN3Q0VDG4 424 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 HTR4Q13639 388 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 NDUFA9Q16795 377 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SLC25A35Q3KQZ1 300 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SLC36A2Q495M3 483 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 IGSF11Q5DX21 431 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 IKBIPQ70UQ0 350 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 CXXC5Q7LFL8 322 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 OVCH2Q7RTZ1 564 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 BBS1Q8NFJ9 593 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 OR10H4Q8NGA5 316 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 GOT1L1Q8NHS2 421 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 EDAQ92838 391 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 NEIL2Q969S2 332 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 CXorf40BQ96DE9 158 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 FAM46AQ96IP4 442 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 GINS4Q9BRT9 223 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 PELOQ9BRX2 385 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ACTR6Q9GZN1 396 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 OR51I1Q9H343 314 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 KCNK12Q9HB15 430 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 MRPL17Q9NRX2 175 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SLC13A4Q9UKG4 626 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 CHST2Q9Y4C5 530 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 CHD5Q8TDI0 1954 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ACACBO00763 2458 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 TRABD2BA6NFA1 517 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms