RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 RAPH1Q70E73 1250 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 GALNT10Q86SR1 603 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 MARCH3Q86UD3 253 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 GGNQ86UU5 652 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 P2RY8Q86VZ1 359 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 ZNF619Q8N2I2 560 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 MUC15Q8N387 334 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 METTL4Q8N3J2 472 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 ZNF525Q8N782 197 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 C3orf56Q8N813 242 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 FBXO36Q8NEA4 188 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 OR2V1Q8NHB1 315 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 KAT2AQ92830 837 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 MSI2Q96DH6 328 aaKnown RBP4.6□□□□□ -1.67
SPG11-208ENST00000558155 VSTM2LQ96N03 204 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 ZNF681Q96N22 645 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 ATOH8Q96SQ7 321 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 HBEGFQ99075 208 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 GPR22Q99680 433 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 CPNE1Q99829 537 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 DHRS9Q9BPW9 319 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 MCMBPQ9BTE3 642 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 POTEKPQ9BYX7 375 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 TBL1XR1Q9BZK7 514 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 GP6Q9HCN6 339 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 GIMAP4Q9NUV9 329 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 FAM120CQ9NX05 1096 aaKnown RBP4.6□□□□□ -1.67
SPG11-208ENST00000558155 PGPEP1Q9NXJ5 209 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 POU2F3Q9UKI9 436 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 UTS2RQ9UKP6 389 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 RNF11Q9Y3C5 154 aa4.6□□□□□ -1.67
SPG11-208ENST00000558155 IGLV3-32A0A0A0MS00 114 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 C17orf51A8MQB3 221 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 E7EQL1 145 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 H7C417 338 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 NDUFS8O00217 210 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 PGRMC1O00264 195 aaKnown RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 ABCD4O14678 606 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 TNFSF11O14788 317 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 PRKD3O94806 890 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 OPN1LWP04000 364 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 LTA4HP09960 611 aaKnown RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 APEHP13798 732 aaKnown RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 GFAPP14136 432 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 ZNF17P17021 662 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 IVDP26440 423 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 SPRP35270 261 aaPredicted RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 GP5P40197 560 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 CCNG1P51959 295 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 ALDH18A1P54886 795 aaKnown RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 CSTF3Q12996 717 aaKnown RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 GGTLC2Q14390 218 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 ACAP2Q15057 778 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 ZNHIT3Q15649 155 aaPredicted RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 LTB4RQ15722 352 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 ZKSCAN8Q15776 578 aaPredicted RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 STK11Q15831 433 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 FAM83EQ2M2I3 478 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 TMEM44Q2T9K0 475 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 CR1LQ2VPA4 569 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 IQCCQ4KMZ1 466 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 ZNF628Q5EBL2 1059 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 SGO1Q5FBB7 561 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 TCHHL1Q5QJ38 904 aaPredicted RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 SH2D4BQ5SQS7 431 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 TIMM23BQ5SRD1 257 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 GRTP1Q5TC63 336 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 FRG2Q64ET8 278 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 C11orf71Q6IPW1 123 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 SLC22A25Q6T423 547 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 KLHL17Q6TDP4 642 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 TMEM108Q6UXF1 575 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 TFAP2EQ6VUC0 442 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 NPSR1Q6W5P4 371 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 Q6ZT83 130 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 CYS1Q717R9 158 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 NUFIP2Q7Z417 695 aaKnown RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 GOLGA7Q7Z5G4 137 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 CCDC91Q7Z6B0 441 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 TDRPQ86YL5 185 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 TUSC5Q8IXB3 177 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 GTPBP8Q8N3Z3 284 aaPredicted RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 PPM1NQ8N819 430 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 CEP112Q8N8E3 955 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 CDYL2Q8N8U2 506 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 BANPQ8N9N5 519 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 SPC24Q8NBT2 197 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 ZNF540Q8NDQ6 660 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 OR4N2Q8NGD1 307 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 OR2W6PQ8NHA6 318 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 RHEBL1Q8TAI7 183 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 ACTRT1Q8TDG2 376 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 PYROXD1Q8WU10 500 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 ZFAND2BQ8WV99 257 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 ZBTB8AQ96BR9 441 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 NXNL1Q96CM4 212 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 MTBPQ96DY7 904 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 CNRIP1Q96F85 164 aaPredicted RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 ADGRG7Q96K78 797 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 FRG2BQ96QU4 278 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms