RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 NADKO95544 446 aaPredicted RBP11.41□□□□□ -0.58
TPM1-209ENST00000558072 LGI1O95970 557 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 IFNW1P05000 195 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 FESP07332 822 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 MSX1P28360 303 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 SLC6A8P48029 635 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 C17orf67Q0P5P2 114 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 MAPK11Q15759 364 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 KLHL26Q53HC5 615 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 RPS26P11Q5JNZ5 115 aaPredicted RBP11.41□□□□□ -0.58
TPM1-209ENST00000558072 SLC30A6Q6NXT4 461 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 RANBP3LQ86VV4 465 aaPredicted RBP11.41□□□□□ -0.58
TPM1-209ENST00000558072 PAPD5Q8NDF8 572 aaKnown RBP11.41□□□□□ -0.58
TPM1-209ENST00000558072 OR4N2Q8NGD1 307 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 APOBEC4Q8WW27 367 aaKnown RBP11.41□□□□□ -0.58
TPM1-209ENST00000558072 TAMM41Q96BW9 452 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 EFHD2Q96C19 240 aaPredicted RBP11.41□□□□□ -0.58
TPM1-209ENST00000558072 UTP23Q9BRU9 249 aaKnown RBP11.41□□□□□ -0.58
TPM1-209ENST00000558072 TIMMDC1Q9NPL8 285 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 EXOSC3Q9NQT5 275 aaKnown RBP11.41□□□□□ -0.58
TPM1-209ENST00000558072 USP22Q9UPT9 525 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 AURKCQ9UQB9 309 aa11.41□□□□□ -0.58
TPM1-209ENST00000558072 TCRBV5S2A0A599 114 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 AP3D1O14617 1153 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 NDUFB5O43674 189 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 FMO6PO60774 539 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 DEAF1O75398 565 aaPredicted RBP11.4□□□□□ -0.58
TPM1-209ENST00000558072 SORBS2O94875 1100 aaKnown RBP11.4□□□□□ -0.58
TPM1-209ENST00000558072 SNX4O95219 450 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 OXSR1O95747 527 aaPredicted RBP11.4□□□□□ -0.58
TPM1-209ENST00000558072 CSTAP01040 98 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 FABP3P05413 133 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 CYP4B1P13584 511 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 EVI2BP34910 448 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 SUMO3P55854 103 aaPredicted RBP11.4□□□□□ -0.58
TPM1-209ENST00000558072 Q0VFX4 171 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 CCNIQ14094 377 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 FGFBP1Q14512 234 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 DEFB109BQ30KR1 87 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 ZNF791Q3KP31 576 aaPredicted RBP11.4□□□□□ -0.58
TPM1-209ENST00000558072 SLC22A10Q63ZE4 541 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 PIWIL3Q7Z3Z3 882 aaKnown RBP11.4□□□□□ -0.58
TPM1-209ENST00000558072 ZNF614Q8N883 585 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 HSH2DQ96JZ2 352 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 BDH2Q9BUT1 245 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 METTL7AQ9H8H3 244 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 LIN28AQ9H9Z2 209 aaKnown RBP11.4□□□□□ -0.58
TPM1-209ENST00000558072 S100A14Q9HCY8 104 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 IL1RAPQ9NPH3 570 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 GPR83Q9NYM4 423 aa11.4□□□□□ -0.58
TPM1-209ENST00000558072 CDHR4A6H8M9 788 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 PRAMEF25A6NGN4 478 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 K7ENP7 123 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 ADAMDEC1O15204 470 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 ZNF264O43296 627 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 DPM1O60762 260 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 UGT2B11O75310 529 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 ENTPD5O75356 428 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 GCM2O75603 506 aaPredicted RBP11.39□□□□□ -0.59
TPM1-209ENST00000558072 DNAJB5O75953 348 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 KRT36O76013 467 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 IGKV1D-16P01601 117 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 P04436 131 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 UBL4AP11441 157 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 RHCEP18577 417 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 CD247P20963 164 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 FASP25445 335 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 SOX3P41225 446 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 ARHGDIAP52565 204 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 COPZ1P61923 177 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 EEF1A1P68104 462 aaKnown RBP11.39□□□□□ -0.59
TPM1-209ENST00000558072 OC90Q02509 493 aaPredicted RBP11.39□□□□□ -0.59
TPM1-209ENST00000558072 TLE3Q04726 772 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 MFAP5Q13361 173 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 RAPSNQ13702 412 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 DUSP7Q16829 419 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 GRAMD1BQ3KR37 738 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 PDZK1Q5T2W1 519 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 INO80CQ6PI98 192 aaPredicted RBP11.39□□□□□ -0.59
TPM1-209ENST00000558072 IL20RBQ6UXL0 311 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 C16orf47Q6ZP98 133 aaPredicted RBP11.39□□□□□ -0.59
TPM1-209ENST00000558072 PRR22Q8IZ63 422 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 ADGRG5Q8IZF4 528 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 CYP4Z2PQ8N1L4 340 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 SIRT6Q8N6T7 355 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 SMYD1Q8NB12 490 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 PHOSPHO1Q8TCT1 267 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 PAQR8Q8TEZ7 354 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 CANT1Q8WVQ1 401 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 PSMF1Q92530 271 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 HGDQ93099 445 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 SEPHS2Q99611 448 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 CHID1Q9BWS9 393 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 KLRF1Q9NZS2 232 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 SELENONQ9NZV5 590 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 C6orf203Q9P0P8 240 aaPredicted RBP11.39□□□□□ -0.59
TPM1-209ENST00000558072 GMPR2Q9P2T1 348 aaKnown RBP11.39□□□□□ -0.59
TPM1-209ENST00000558072 TESQ9UGI8 421 aaKnown RBP11.39□□□□□ -0.59
TPM1-209ENST00000558072 SH3GLB1Q9Y371 365 aa11.39□□□□□ -0.59
TPM1-209ENST00000558072 FREM2Q5SZK8 3169 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms