RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 BHLHE22Q8NFJ8 381 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-234ENST00000557703 FBXO30Q8TB52 745 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 SARAFQ96BY9 339 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 JSRP1Q96MG2 331 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-234ENST00000557703 CCDC106Q9BWC9 280 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 EVA1AQ9H8M9 152 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 CACYBPQ9HB71 228 aaKnown RBP12.49□□□□□ -0.41
SHMT2-234ENST00000557703 BCL2L10Q9HD36 194 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 SLC6A13Q9NSD5 602 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 SLC25A37Q9NYZ2 338 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 VAPAQ9P0L0 249 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 NPIPA1Q9UND3 350 aa12.49□□□□□ -0.41
SHMT2-234ENST00000557703 BAHCC1Q9P281 2608 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 PINLYPA6NC86 204 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 BCKDKO14874 412 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 TNFRSF21O75509 655 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 TFPTP0C1Z6 253 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 ETS2P15036 469 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 MST1P26927 711 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 GDF1P27539 372 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 PMP22Q01453 160 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 GPAT3Q53EU6 434 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 PRR30Q53SZ7 412 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-234ENST00000557703 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHMT2-234ENST00000557703 BICRALQ6AI39 1079 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 MTFR2Q6P444 385 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 HACD2Q6Y1H2 254 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 DNAJC14Q6Y2X3 702 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-234ENST00000557703 Q6ZPB1 254 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-234ENST00000557703 TRILQ7L0X0 811 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 EIF3MQ7L2H7 374 aaKnown RBP12.48□□□□□ -0.41
SHMT2-234ENST00000557703 SERPINA11Q86U17 422 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 RETREG3Q86VR2 466 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 MSRB3Q8IXL7 192 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 PEX5LQ8IYB4 626 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 OR4K17Q8NGC6 315 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 NEIL3Q8TAT5 605 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 DUSP19Q8WTR2 217 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 RAB8BQ92930 207 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 SLC35B4Q969S0 331 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 LRRC58Q96CX6 371 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 GNRHR2Q96P88 292 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 HOPXQ9BPY8 73 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-234ENST00000557703 THUMPD3Q9BV44 507 aaKnown RBP12.48□□□□□ -0.41
SHMT2-234ENST00000557703 GALNT9Q9HCQ5 603 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-234ENST00000557703 SLAMF8Q9P0V8 285 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-234ENST00000557703 ZNF232Q9UNY5 417 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 ZNF835Q9Y2P0 537 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 IFT52Q9Y366 437 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 KCNE3Q9Y6H6 103 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 HIVEP3Q5T1R4 2406 aa12.48□□□□□ -0.41
SHMT2-234ENST00000557703 TRGV5A0A0B4J1U4 118 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 A0A0G2JMM0 328 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 LOC100653049A0A140TA62 436 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 A0A1B0GUH1 482 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 A0A1W2PPB8 328 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 A0A1W2PRS3 328 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 AGAP5A6NIR3 686 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 KIR3DP1A8MWS1 328 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 G3V3Y1 287 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 FBP2O00757 339 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 PRRG2O14669 202 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 MRASO14807 208 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 KRT34O76011 436 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 WISP1O95388 367 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 H6PDO95479 791 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 ACTL6AO96019 429 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 DBIP07108 87 aaKnown RBP12.47□□□□□ -0.41
SHMT2-234ENST00000557703 STSP08842 583 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 COX4I1P13073 169 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 CHMP24386 653 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 PTGER4P35408 488 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 EIF1P41567 113 aaKnown RBP12.47□□□□□ -0.41
SHMT2-234ENST00000557703 MAGEA5P43359 124 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 GPR68Q15743 365 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 COX20Q5RI15 118 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 CCNJQ5T5M9 372 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 TYW3Q6IPR3 259 aaKnown RBP12.47□□□□□ -0.41
SHMT2-234ENST00000557703 REEP3Q6NUK4 255 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 AAGABQ6PD74 315 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 FRRS1Q6ZNA5 592 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 SNX32Q86XE0 403 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 SPPL2CQ8IUH8 684 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 PM20D2Q8IYS1 436 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 CCDC197Q8NCU1 140 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 SLC38A5Q8WUX1 472 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 SPATA5L1Q9BVQ7 753 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 OR2B2Q9GZK3 357 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 SLC38A1Q9H2H9 487 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 LDAHQ9H6V9 325 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 KAT8Q9H7Z6 458 aaKnown RBP12.47□□□□□ -0.41
SHMT2-234ENST00000557703 EXOSC3Q9NQT5 275 aaKnown RBP12.47□□□□□ -0.41
SHMT2-234ENST00000557703 FBXO34Q9NWN3 711 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 ARMCX1Q9P291 453 aa12.47□□□□□ -0.41
SHMT2-234ENST00000557703 DSPPQ9NZW4 1301 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 C7orf72A4D263 438 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 SERINC4A6NH21 518 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 FAM166BA8MTA8 275 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms