RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PLSCR4Q9NRQ2 329 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 ACSS1Q9NUB1 689 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-213ENST00000557262 BAIAP2L1Q9UHR4 511 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 VDAC3Q9Y277 283 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 FIS1Q9Y3D6 152 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 A0A087WZY1 265 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 SHISA8B8ZZ34 492 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 SIAH2O43255 324 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 AQP8O94778 261 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 OXSR1O95747 527 aaPredicted RBP14.27□□□□□ -0.13
TUBB3-213ENST00000557262 FGF4P08620 206 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 NEFHP12036 1026 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 SDC1P18827 310 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 LCN1P31025 176 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 PDE7AQ13946 482 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 GUSBP1Q15486 140 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 ZCCHC12Q6PEW1 402 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 GGNQ86UU5 652 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 WDR75Q8IWA0 830 aaKnown RBP14.27□□□□□ -0.13
TUBB3-213ENST00000557262 C4orf33Q8N1A6 199 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 SLC16A11Q8NCK7 471 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 MTERF3Q96E29 417 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 PIK3IP1Q96FE7 263 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 PAQR5Q9NXK6 330 aaPredicted RBP14.27□□□□□ -0.13
TUBB3-213ENST00000557262 TMED5Q9Y3A6 229 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 DNAJC15Q9Y5T4 150 aa14.27□□□□□ -0.13
TUBB3-213ENST00000557262 EIF1AYO14602 144 aaKnown RBP14.26□□□□□ -0.13
TUBB3-213ENST00000557262 KCNK2O95069 426 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 INHBBP09529 407 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 ACP2P11117 423 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 ZNF17P17021 662 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 IL11P20809 199 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 FPR1P21462 350 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 ASMTP46597 345 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 EIF1AXP47813 144 aaKnown RBP14.26□□□□□ -0.13
TUBB3-213ENST00000557262 RPL38P63173 70 aaKnown RBP14.26□□□□□ -0.13
TUBB3-213ENST00000557262 PCLAFQ15004 111 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 ACKR1Q16570 336 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.26□□□□□ -0.13
TUBB3-213ENST00000557262 CPTPQ5TA50 214 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 KANK2Q63ZY3 851 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 FIGNL1Q6PIW4 674 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 SZRD1Q7Z422 152 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 R3HCC1LQ7Z5L2 792 aaKnown RBP14.26□□□□□ -0.13
TUBB3-213ENST00000557262 GALNT10Q86SR1 603 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 KRTAP1-3Q8IUG1 177 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 P3H2Q8IVL5 708 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 LRRC75A-AS1Q8N1F1 130 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 GTPBP8Q8N3Z3 284 aaPredicted RBP14.26□□□□□ -0.13
TUBB3-213ENST00000557262 ACTRT2Q8TDY3 377 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 EPS8L3Q8TE67 593 aaKnown RBP14.26□□□□□ -0.13
TUBB3-213ENST00000557262 MS4A4EQ96PG1 132 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 KLHL4Q9C0H6 718 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 UBQLN4Q9NRR5 601 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 EMC9Q9Y3B6 208 aa14.26□□□□□ -0.13
TUBB3-213ENST00000557262 LSM1O15116 133 aaKnown RBP14.25□□□□□ -0.13
TUBB3-213ENST00000557262 SMPD2O60906 423 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 ALOX5P09917 674 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 HPGDP15428 266 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 DDX5P17844 614 aaKnown RBP14.25□□□□□ -0.13
TUBB3-213ENST00000557262 ADSLP30566 484 aaPredicted RBP14.25□□□□□ -0.13
TUBB3-213ENST00000557262 CCKARP32238 428 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 SLC6A8P48029 635 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 SERPINB4P48594 390 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 RAC1P63000 192 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 MLC1Q15049 377 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 DUSP5Q16690 384 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 UGT3A2Q3SY77 523 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 GALNTL6Q49A17 601 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 ANKRD34AQ69YU3 496 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 PPP4R4Q6NUP7 873 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 MFSD12Q6NUT3 480 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 LRIG3Q6UXM1 1119 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 C22orf34Q6ZV56 151 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 ZNF550Q7Z398 422 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 MISPQ8IVT2 679 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 GATSQ8NAP1 163 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 OR6K3Q8NGY3 331 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 OR10D3Q8NH80 312 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 CLHC1Q8NHS4 586 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 ZBTB8AQ96BR9 441 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 C16orf58Q96GQ5 468 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 ZC3HAV1LQ96H79 300 aaKnown RBP14.25□□□□□ -0.13
TUBB3-213ENST00000557262 GMPPAQ96IJ6 420 aaPredicted RBP14.25□□□□□ -0.13
TUBB3-213ENST00000557262 MARK4Q96L34 752 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 FBXO34Q9NWN3 711 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 TRAF6Q9Y4K3 522 aa14.25□□□□□ -0.13
TUBB3-213ENST00000557262 UQCRHLA0A096LP55 91 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 A0A1W2PQD3 144 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 A0A1W2PRB8 838 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 C7orf72A4D263 438 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 SCDO00767 359 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 ADAMDEC1O15204 470 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 SYNGR4O95473 234 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 HSPA4LO95757 839 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 PLGP00747 810 aaPredicted RBP14.24□□□□□ -0.13
TUBB3-213ENST00000557262 OPN1LWP04000 364 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 BCKDHAP12694 445 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 PSMA4P25789 261 aaKnown RBP14.24□□□□□ -0.13
TUBB3-213ENST00000557262 PRIM2P49643 509 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms